DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gstt2 and GstD9

DIOPT Version :9

Sequence 1:NP_036928.1 Gene:Gstt2 / 29487 RGDID:69362 Length:244 Species:Rattus norvegicus
Sequence 2:NP_001287303.1 Gene:GstD9 / 41502 FlyBaseID:FBgn0038020 Length:218 Species:Drosophila melanogaster


Alignment Length:237 Identity:58/237 - (24%)
Similarity:97/237 - (40%) Gaps:57/237 - (24%)


- Green bases have known domain annotations that are detailed below.


  Rat     3 LELYLDLLSQPSRAVYIFAKKNGIPFQLRTVDLLKGQHLSEQFSQVNCLKKVPVLKDGSFVLTES 67
            |:.|..|.|.|.|::.:.|:..|:....:.|||..|:||..:|.::|....:|.|.|..|.:.||
  Fly     2 LDFYYMLYSAPCRSILMTARALGLELNKKQVDLDAGEHLKPEFVKINPQHTIPTLVDDGFAIWES 66

  Rat    68 TAILIYLSSKYQVADHWYPADLQARAQVHEYLGWHADNIRGTFGVLLWTKVLGPLIGVQVPEEKV 132
            .||||||:.||......||.|.|.||.:::.|.:....:..::....:.::...:.....|:.  
  Fly    67 RAILIYLAEKYDKDGSLYPKDPQQRAVINQRLFFDLSTLYQSYVYYYYPQLFEDVKKPADPDN-- 129

  Rat   133 ERNRNSMVLALQRLEDKFLRDRAFIAGQQ------VTLADLMSLEELIQPVALGCNLFE------ 185
                      |::::|.|......:.|||      :||||...|..:        :.||      
  Fly   130 ----------LKKIDDAFAMFNTLLKGQQYAALNKLTLADFALLATV--------STFEISEYDF 176

  Rat   186 GR-PQLTAWRERVEAFLGAELCQEAHNPIMSVLGQAAKKTLP 226
            |: |::..|.:.                        |||.:|
  Fly   177 GKYPEVVRWYDN------------------------AKKVIP 194

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Gstt2NP_036928.1 GST_N_Theta 3..78 CDD:239348 28/74 (38%)