DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gstt2 and GstE8

DIOPT Version :9

Sequence 1:NP_036928.1 Gene:Gstt2 / 29487 RGDID:69362 Length:244 Species:Rattus norvegicus
Sequence 2:NP_001286571.1 Gene:GstE8 / 37113 FlyBaseID:FBgn0063492 Length:222 Species:Drosophila melanogaster


Alignment Length:223 Identity:67/223 - (30%)
Similarity:103/223 - (46%) Gaps:21/223 - (9%)


- Green bases have known domain annotations that are detailed below.


  Rat     3 LELYLDLLSQPSRAVYIFAKKNGIPFQLRTVDLLKGQHLSEQFSQVNCLKKVPVLKDGSFVLTES 67
            |.||....|.|.||..:.....|||::...::.|..:.||.:|.:.|....||.|:|....:.:|
  Fly     4 LILYGTEASPPVRAAKLTLAALGIPYEYVKINTLAKETLSPEFLRKNPQHTVPTLEDDGHFIWDS 68

  Rat    68 TAILIYLSSKYQVADHWYPADLQARAQVHEYLGWHADN----IRGTFGVLLWTKVLGPLIGVQVP 128
            .||..||.|||..:|..||.||..||.|.:.|  |.::    :.|..|:   ||.|.......:|
  Fly    69 HAISAYLVSKYGQSDTLYPKDLLQRAVVDQRL--HFESGVVFVNGLRGI---TKPLFATGQTTIP 128

  Rat   129 EEKVERNRNSMVLALQRLEDKFLRDRAFIAGQQVTLAD---LMSLEELIQPVALGCNLFEGRPQL 190
            :|     |...|:.:....:.||....||||.|:|:||   :.|:..|...|.:....:   ..:
  Fly   129 KE-----RYDAVIEIYDFVETFLTGHDFIAGDQLTIADFSLITSITALAVFVVIDTVKY---ANI 185

  Rat   191 TAWRERVEAF-LGAELCQEAHNPIMSVL 217
            |||.:|:|.. ...|.|.:....::::|
  Fly   186 TAWIKRIEELPYYEEACGKGARDLVTLL 213

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Gstt2NP_036928.1 GST_N_Theta 3..78 CDD:239348 25/74 (34%)