DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slc26a4 and CG5404

DIOPT Version :9

Sequence 1:NP_062087.1 Gene:Slc26a4 / 29440 RGDID:3293 Length:780 Species:Rattus norvegicus
Sequence 2:NP_650482.1 Gene:CG5404 / 41901 FlyBaseID:FBgn0038354 Length:627 Species:Drosophila melanogaster


Alignment Length:631 Identity:158/631 - (25%)
Similarity:270/631 - (42%) Gaps:156/631 - (24%)


- Green bases have known domain annotations that are detailed below.


  Rat    33 QQQRERRLPERRTLRDSLARSCSCSRKRAFGA---------LKALLPILDWLPKYRVKEWLLSDI 88
            |.:.|....|:.|.|..|..:.|.....|..|         |...:|:..|||.|.. ||.:.|.
  Fly     4 QLETEAEALEKATARALLPGAISKPASEAGKAPRMNKWKRRLHRHVPVFQWLPLYST-EWGIDDF 67

  Rat    89 ISGVSTGLVGTLQGMAYALLAAVPVQYGLYSAFFPILTYFVFGTSRHISVGPFPVVSLMVGSVVL 153
            |:|::.||....:.||.||||.:|.:|||.|||...|.|.|||:...:.:||..:|:|:  ||..
  Fly    68 IAGITLGLTIIPESMACALLAGLPARYGLCSAFIGPLIYMVFGSIDKVIIGPTSLVALV--SVQF 130

  Rat   154 SMAPDDHFLVPSGNGSTLNTTTLDTGTRDAARVLLASTLTLLVGIIQLVFGGLQIGFIVRYLADP 218
            ::.....|                           |..||.|.||:|::.|.:::|||..:::.|
  Fly   131 TVGRPIEF---------------------------AFLLTFLSGIVQIIMGTMRMGFIFEFISMP 168

  Rat   219 LVGGFTTAAAFQVLVSQLKIVLNV-----STKNYNGVLSIIYTLIEIFQNIGDTNIADFIAGLLT 278
            ::..|::|.|..|:.||||::|.:     ...|..|:||         ..|.::|:||.|.|:..
  Fly   169 VIKAFSSATAILVIESQLKVLLGIKYLVAGLMNSVGMLS---------SRIEESNMADLIMGVCA 224

  Rat   279 IIVCMAVKEL----NDRFKHKI-------------PVPIPIEVIVTII--------ATAISYGA- 317
            |:..:.::.|    |:..::||             .:.:.|..||:.|        ..|:|..| 
  Fly   225 IVFLLLLELLDRVANNEKRNKILRIFCRYLSTSRNTLIVLIAAIVSFIWIQKCGQVPYALSKNAL 289

  Rat   318 --------------NLEANYNA-GIVKSIPSGFLPPVLPSVGLFSDMLAASFSIAVVAYAIAVSV 367
                          ..|.||:. .::|.:..|.:  |:|.||:.::                :|:
  Fly   290 STLPNFTVPSFHIETAERNYSIWEVLKELNIGII--VIPIVGILTN----------------ISI 336

  Rat   368 GKVYATKHDYIIDGNQEFIAFGISNVFSGFFSCFVATTALSRTAVQESTGGKTQVAGLISAVIVM 432
            ||:....   ::|.|||.:..|:.|:|........::.|.:|.|:..:.|.:|.:|.|...:||:
  Fly   337 GKLTPKG---LVDTNQELLTVGLCNMFGSCVQAMPSSGAFTRYAISTACGLRTPMANLYLGIIVL 398

  Rat   433 VAIVALGKLLEPLQKSVLAAVVIANLKGMFMQVCD--VP-RLWKQNKTDAVIWVFTCIMSIILGL 494
            :|:..|......:.::.|||::|.::    ..:.|  :| |||:.:|.|...|:....:|::.|:
  Fly   399 LALSYLSPYFNYIPEATLAAILICSI----FTLLDFKLPMRLWRDSKRDFATWLLCFCVSVLFGV 459

  Rat   495 DLGLLAGLLFGLLTVV-------LRV---QFPSWNGLGSVPSTDIYKSITHYKNLEEPEGVKILR 549
            ::||...::...|.::       :||   |......:...||..||....:|  |.|    ::| 
  Fly   460 EVGLFVSIVVTALHLLFLWARPEIRVKIEQLDEMQYIRVTPSNGIYFPAINY--LRE----RVL- 517

  Rat   550 FSSPIFYGNVDGFKKCVKS----TVGFDAIRVYNKRLKALRRIQKL 591
                         |.|.::    ||..|..|:......|.:.|.||
  Fly   518 -------------KACEQADFRITVVIDGQRISGMDYTAAQGISKL 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc26a4NP_062087.1 sulP 70..725 CDD:273284 148/585 (25%)
CG5404NP_650482.1 sulP 50..557 CDD:273284 148/585 (25%)
STAS_SulP_like_sulfate_transporter 498..>554 CDD:132913 18/73 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000041
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X49
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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