Sequence 1: | NP_058868.1 | Gene: | Zfp36l1 / 29344 | RGDID: | 62009 | Length: | 338 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001259490.1 | Gene: | Tis11 / 32222 | FlyBaseID: | FBgn0011837 | Length: | 436 | Species: | Drosophila melanogaster |
Alignment Length: | 400 | Identity: | 128/400 - (32%) |
---|---|---|---|
Similarity: | 180/400 - (45%) | Gaps: | 89/400 - (22%) |
- Green bases have known domain annotations that are detailed below.
Rat 11 FDLSEVLCKGNKMLNYSTPSAGGCLLDRKAVGTP--AGGGFPRRHSVTLPSSKFHQNQLLSSLKG 73
Rat 74 EPAPTLSSRDSRFRDRSFSEGGERLLPTQKQPGSGQ--VNSSRYKTELCRPFEENGACKYGDKCQ 136
Rat 137 FAHGIHELRSLTRHPKYKTELCRTFHTIGFCPYGPRCHFIHNAEERRA-----LAGGRDLSADRP 196
Rat 197 RLQHSFSFAGFPSAAATAAATGLLDSPTS---------------------ITPPPILSADDLLGS 240
Rat 241 PT-----LPDGTNNPFAF----------------SSQELASLFAPSMGL---------------- 268
Rat 269 -PGGGSPTTFLFRPMSESPHMFDSP---PSPQDSLSDHEGYLSSSSSS-----HSGSDSPTLDNS 324
Rat 325 RRLPIFSRLS 334 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Zfp36l1 | NP_058868.1 | Necessary and sufficient for the association with mRNA decay enzymes and mRNA decay activation. /evidence=ECO:0000250|UniProtKB:Q07352 | 1..111 | 25/103 (24%) | |
Tis11B_N | 1..105 | CDD:398311 | 23/95 (24%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 93..113 | 6/21 (29%) | |||
CTH1 | <115..>177 | CDD:227395 | 51/61 (84%) | ||
Necessary for mRNA decay activation. /evidence=ECO:0000250|UniProtKB:Q07352 | 185..338 | 42/216 (19%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 273..338 | 21/69 (30%) | |||
Tis11 | NP_001259490.1 | zf-CCCH | 136..161 | CDD:279036 | 21/24 (88%) |
zf-CCCH | 174..198 | CDD:279036 | 20/23 (87%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 61 | 1.000 | Domainoid score | I10179 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000616 | |
OrthoInspector | 1 | 1.000 | - | - | otm45321 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101179 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR12547 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
7 | 6.910 |