DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prdx2 and Jafrac1

DIOPT Version :9

Sequence 1:NP_058865.2 Gene:Prdx2 / 29338 RGDID:3838 Length:198 Species:Rattus norvegicus
Sequence 2:NP_001285202.1 Gene:Jafrac1 / 53578 FlyBaseID:FBgn0040309 Length:194 Species:Drosophila melanogaster


Alignment Length:185 Identity:133/185 - (71%)
Similarity:156/185 - (84%) Gaps:0/185 - (0%)


- Green bases have known domain annotations that are detailed below.


  Rat    10 KPAPDFTATAVVDGAFKEIKLSDYRGKYVVLFFYPLDFTFVCPTEIIAFSDHAEDFRKLGCEVLG 74
            ||||.|..||||:|.||:||||||:|||:|||||||||||||||||||||:.|.:|||:.|||:|
  Fly     6 KPAPAFAGTAVVNGVFKDIKLSDYKGKYLVLFFYPLDFTFVCPTEIIAFSESAAEFRKINCEVIG 70

  Rat    75 VSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTKSLSQNYGVLKNDEGIAYRGLFIIDAKGVLR 139
            .|.|||||||||||||||:||||.::||||||.:..::::||||..:.||.:|||||||.|..||
  Fly    71 CSTDSQFTHLAWINTPRKQGGLGSMDIPLLADKSMKVARDYGVLDEETGIPFRGLFIIDDKQNLR 135

  Rat   140 QITVNDLPVGRSVDEALRLVQAFQYTDEHGEVCPAGWKPGSDTIKPNVDDSKEYF 194
            |||||||||||||:|.|||||||||||::||||||.||||..|:..:...|||||
  Fly   136 QITVNDLPVGRSVEETLRLVQAFQYTDKYGEVCPANWKPGQKTMVADPTKSKEYF 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prdx2NP_058865.2 PRX_Typ2cys 8..179 CDD:239313 125/168 (74%)
Jafrac1NP_001285202.1 PRX_Typ2cys 4..175 CDD:239313 125/168 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 201 1.000 Domainoid score I2914
eggNOG 1 0.900 - - E1_COG0450
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H21182
Inparanoid 1 1.050 283 1.000 Inparanoid score I2793
OMA 1 1.010 - - QHG54000
OrthoDB 1 1.010 - - D1326484at2759
OrthoFinder 1 1.000 - - FOG0000434
OrthoInspector 1 1.000 - - otm45874
orthoMCL 1 0.900 - - OOG6_100111
Panther 1 1.100 - - O PTHR10681
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X272
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.840

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