DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csrp2 and Rassf

DIOPT Version :9

Sequence 1:NP_803174.2 Gene:Csrp2 / 29317 RGDID:61950 Length:193 Species:Rattus norvegicus
Sequence 2:NP_651126.3 Gene:Rassf / 42734 FlyBaseID:FBgn0039055 Length:806 Species:Drosophila melanogaster


Alignment Length:67 Identity:29/67 - (43%)
Similarity:35/67 - (52%) Gaps:1/67 - (1%)


- Green bases have known domain annotations that are detailed below.


  Rat   118 KCSRCGDSVYAAEKIIGAGKPWHKNCFRCAKCGKSLESTTLTEKEGEIYCK-GCYAKNFGPKGFG 181
            ||.:||..||.||:....|..||..|.||.:|||.|......|.:...||. .||...|||:.||
  Fly     3 KCHKCGKPVYFAERKQSIGYDWHPECLRCEECGKRLNPGQHAEHKSVPYCHVPCYGALFGPQLFG 67

  Rat   182 YG 183
            :|
  Fly    68 HG 69

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Csrp2NP_803174.2 LIM1_CRP2 9..63 CDD:188864
Nuclear localization signal. /evidence=ECO:0000255 64..69
LIM2_CRP2 119..172 CDD:188871 21/53 (40%)
RassfNP_651126.3 LIM_TLP_like 4..57 CDD:188785 20/52 (38%)
UBQ 660..744 CDD:294102
Nore1-SARAH 762..799 CDD:293125
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1700
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000284
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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