DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl4a and Arf4

DIOPT Version :10

Sequence 1:NP_062059.1 Gene:Arl4a / 29308 RGDID:2152 Length:200 Species:Rattus norvegicus
Sequence 2:NP_524631.1 Gene:Arf4 / 43823 FlyBaseID:FBgn0013749 Length:180 Species:Drosophila melanogaster


Alignment Length:181 Identity:76/181 - (41%)
Similarity:116/181 - (64%) Gaps:6/181 - (3%)


- Green bases have known domain annotations that are detailed below.


  Rat     9 TSILSSLPSFQSFHIVILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNTEKIKVTLGNSKTVTFHF 73
            :|:|:.|...:...|:::|||.|||||:||:|:..|.|.|:||.|||.|.::.     |.:.|..
  Fly     6 SSLLTRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY-----KNICFTV 65

  Rat    74 WDVGGQEKLRPLWKSYTRCTDGIVFVVDSVDVERMEEAKTELHKITRISENQGVPVLIVANKQDL 138
            ||||||:|:||||:.|.:.|.|::|||||.|.:|:.||:.||..:.:..|.:...:|:.||||||
  Fly    66 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAVLLVFANKQDL 130

  Rat   139 RNSLSLSEIEKLLAMGELSSSTPWHLQPTCAIIGDGLKEGLEKLHDMIIKR 189
            .|:::.:|:...|.:.:| .:..|.:|.|||..|.||.|||:.|...:.|:
  Fly   131 PNAMTAAELTDKLRLNQL-RNRHWFIQSTCATQGHGLYEGLDWLSAELAKK 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl4aNP_062059.1 Arl4_Arl7 18..200 CDD:206719 73/172 (42%)
Arf4NP_524631.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..180 CDD:476819 75/179 (42%)

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