DRSC/TRiP Functional Genomics Resources

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Protein Alignment Meox2 and unpg

DIOPT Version :10

Sequence 1:NP_058845.2 Gene:Meox2 / 29279 RGDID:3079 Length:303 Species:Rattus norvegicus
Sequence 2:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster


Alignment Length:285 Identity:82/285 - (28%)
Similarity:110/285 - (38%) Gaps:91/285 - (31%)


- Green bases have known domain annotations that are detailed below.


  Rat     1 MEHPLFGCLRSPHATAQGLHPFSQS--------------SLALHGRSDHMSYPELSTSSSSCIIA 51
            :.|||.......:..|.|:.|...|              ||::|.|..||:            .|
  Fly   149 LPHPLDTRFLPFNPAAAGVAPTDLSYRRLAELMNQDYVHSLSVHARLQHMA------------AA 201

  Rat    52 GYPNEEGMFASQHHRGHHHHHHHHHHHHQQQQHQALQSNWHLPQMSSPPSAARHSLCLQPDSGGP 116
            |..:|:                              |:|..:.|:..|.....||...:..|..|
  Fly   202 GRMHED------------------------------QANPGMAQLQEPTPPQAHSSPAKSGSHSP 236

  Rat   117 PE----LGSSPPVLCSNSSSLGSSTPTGAACAPGDYGRQALSPAEVEK-RSGSKRKSDSSD---- 172
            .|    :|......||..    |.:......:|.:|.      .|::| |:|:...|||.|    
  Fly   237 MEPALDVGMDEDFECSGD----SCSDISLTMSPRNYN------GEMDKSRNGAYTNSDSEDCSDD 291

  Rat   173 ---------------SQEGNYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVN 222
                           ..:||..|. |||.|:.|||||.||:.|||.||....||:...|.:||.:
  Fly   292 EGAQSRHEGGGMGGKDSQGNGSSS-NSKSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATS 355

  Rat   223 LDLTERQVKVWFQNRRMKWKRVKGG 247
            |.|:|.|||:||||||.||||||.|
  Fly   356 LKLSEVQVKIWFQNRRAKWKRVKAG 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Meox2NP_058845.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..191 30/151 (20%)
Homeodomain 187..243 CDD:459649 32/55 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 279..303
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 30/51 (59%)
Blue background indicates that the domain is not in the aligned region.

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