DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcpt1 and CG18420

DIOPT Version :9

Sequence 1:NP_058841.1 Gene:Mcpt1 / 29265 RGDID:3062 Length:247 Species:Rattus norvegicus
Sequence 2:NP_995715.1 Gene:CG18420 / 2768924 FlyBaseID:FBgn0028866 Length:299 Species:Drosophila melanogaster


Alignment Length:296 Identity:73/296 - (24%)
Similarity:114/296 - (38%) Gaps:90/296 - (30%)


- Green bases have known domain annotations that are detailed below.


  Rat     1 MQALLFLMAL--------LLPSGAGAE-------EIIGGVESIPHSRPYMAHLDIITERGLKDSC 50
            |.::|.|:.:        .|.|..|..       .|:.|..::.:|.|:||.|...:.:.:   |
  Fly     8 MASILLLLTVFPLLGSTQFLDSECGTRSPLKLGPRIVNGKVAVRNSSPWMAFLHTSSNQFI---C 69

  Rat    51 GGFLITRQFVLTAAHC--RGREITVTLGAHDVSKREYTQQKIKVEKQFIHKNYNFLPNLH--DIM 111
            ||.||:|:.|||||||  ....|.|.||.::...:.|.::. :|.:.|.|:.|:  ||.|  ||.
  Fly    70 GGTLISRRLVLTAAHCFIPNTTIVVRLGEYNRKLKGYREEH-QVNRTFQHRFYD--PNTHANDIA 131

  Rat   112 LLKLEKQVELTPAVDVVPLPSPSDFIHPGTLCWTA---------------GWGRTGVKDPTSDTL 161
            ||:|...|.....            |.|..:.|.|               |||||.....:|: |
  Fly   132 LLRLVSNVVYKAN------------IRPICIMWDASWKHHIDSIKVLTGTGWGRTESMHDSSE-L 183

  Rat   162 REVALRIMDEEACKIYRHYDNNF-------QVCVGLSTRLQTAYTGDSGGPLLCAGVVHGIVSY- 218
            |.:.:.....:.|.......|.|       .:|:           ||:|||      |..:|.| 
  Fly   184 RTLDISRQPSKMCAFGSVLSNQFCAGNWNSNLCI-----------GDTGGP------VGAMVRYR 231

  Rat   219 ------------GHPDATPPAVFTRIAPYVPWINTV 242
                        .:.....|:|||.:..::.:|..:
  Fly   232 NAFRFVQVGIAITNKRCQRPSVFTDVMSHIEFIRRI 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcpt1NP_058841.1 Tryp_SPc 20..239 CDD:214473 66/257 (26%)
Tryp_SPc 21..242 CDD:238113 67/259 (26%)
CG18420NP_995715.1 Tryp_SPc 42..264 CDD:214473 66/257 (26%)
Tryp_SPc 43..267 CDD:238113 67/259 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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