Sequence 1: | NP_068837.2 | Gene: | Clip2 / 29264 | RGDID: | 62019 | Length: | 1047 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_727769.3 | Gene: | mud / 44839 | FlyBaseID: | FBgn0002873 | Length: | 2567 | Species: | Drosophila melanogaster |
Alignment Length: | 892 | Identity: | 193/892 - (21%) |
---|---|---|---|
Similarity: | 347/892 - (38%) | Gaps: | 250/892 - (28%) |
- Green bases have known domain annotations that are detailed below.
Rat 341 LTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHI-----------CEVE 394
Rat 395 -----------------KEIALLKAQHEQYVAEAEEKL--------QRARLLVENV-------RK 427
Rat 428 EKVDLSNQLEEERRKVEDLQFRVEEESITKGDLETQTQLEHARIGE----------LEQSLLLEK 482
Rat 483 AQAERLLREL---ADNRLTTVAEKSRVLQLEEELSLRRGEIEELQHCLLQSGPPPADH------P 538
Rat 539 EAAETLRLR-----ERLLSASKEHQRDS-------TLLQDKYEHMLKTYQTEVDKLRAANEKYAQ 591
Rat 592 EVADLKAKVQQAT----------TENMGLMDNWKSKLDSLASDHQKSLEDLKATLNSGPGAQQKE 646
Rat 647 IGELKA-------LVEGIKME---HQLELGNLQAKHDLETAMHG-----KE---------KEGLR 687
Rat 688 QKLQEAQEELAGLQQ-----HWR-AQLEEQASQHRLELQEAQDQCRD------AQLRVQ--ELEG 738
Rat 739 LDVEYRGQAQAIEFLKEQIS--LAEK-KMLDY-----------------------------EMLQ 771
Rat 772 RAEAQSRQEAERLREKLLVAENRLQAV-ESLCSAQHSHVIESNDLSEEKIRMKETVEGLQDKLNK 835
Rat 836 RDKEVAALTSQMDMLRAQVSALENKCKSGEKKIDSLLKEKRRLEAELEAVSRKTHD--------- 891
Rat 892 --ASGQLVHISQELLRKERSLNELRVLLLEANRHSPGPERDLSREVHKAEWRIKEQKLKDD--IR 952
Rat 953 GLREKLTGL--------------DKEKSLSEQKRYSLIDPASAPELLRLQHQLVSTEDALRDALD 1003
Rat 1004 QAQQVERLVEALRGC----------SDRTQTISNSGSA-NGIHQPDK 1039 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Clip2 | NP_068837.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..72 | ||
CAP_GLY | 82..146 | CDD:396049 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 196..216 | ||||
CAP_GLY | 222..286 | CDD:396049 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 314..340 | ||||
Smc | <357..1016 | CDD:224117 | 177/840 (21%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1022..1047 | 10/19 (53%) | |||
mud | NP_727769.3 | SMC_prok_B | 319..1178 | CDD:274008 | 5/22 (23%) |
SCP-1 | 853..1571 | CDD:114219 | 95/435 (22%) | ||
Smc | 1234..>1944 | CDD:224117 | 161/766 (21%) | ||
DUF948 | 1392..1517 | CDD:295114 | 28/128 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |