Sequence 1: | NP_062051.2 | Gene: | Tlr4 / 29260 | RGDID: | 3870 | Length: | 835 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_523797.1 | Gene: | Toll-7 / 37272 | FlyBaseID: | FBgn0034476 | Length: | 1446 | Species: | Drosophila melanogaster |
Alignment Length: | 1044 | Identity: | 218/1044 - (20%) |
---|---|---|---|
Similarity: | 376/1044 - (36%) | Gaps: | 350/1044 - (33%) |
- Green bases have known domain annotations that are detailed below.
Rat 58 LDLSFNPLK-ILRSYSFSNFSQLQWLDLSRCEIETIEDKAWHGLNQLSTLVLTGNPIKSFSPGSF 121
Rat 122 SG---------------------LTNLENLVAVETKMTSLEGFHIGQ-----LISLKKLNVAHNL 160
Rat 161 I-----HSFKLPEYFSNLTNLEHVDLSYNYIQTISVKDLQFLRENPQVNL-SLDLSLNPIDSIQA 219
Rat 220 QAFQGIR-LHELTLRSNF----------------------NSSNVLKMCLQNMTGLHVHRLILGE 261
Rat 262 FKNERNLESFDRSVMEGLCNVSIDEFRLTYINHFSDDIYNLNCLANISAMSFTGVHIKHIADVPR 326
Rat 327 HFKWQSLSIIRCHLKPFPKLSLPFLKSWTLTTNREDISF-----GQLA-LPSLRYLDLSRNAMSF 385
Rat 386 RGCCSYSDFGTNNLKYLDLSFNGVILMSANFMGLEE---LEYLDFQHSTLKKVTEFSVFLSLEKL 447
Rat 448 LYLD------------ISYTN-TKIDFDGIFLGLISLNTLKMA--------------GNSFK-DN 484
Rat 485 TL--------------------------------------------------------------- 486
Rat 487 ----------------------------------------------------------SNVFTNT 493
Rat 494 TNLTFLDLSKCQLEQISRGVFDTLYRLQLLNMSHNNLLFLDPSHYKQLYSLRTLDCSFNRIETSK 558
Rat 559 G-----------------------ILQ----HFPKSLAVFNLTNNSVACICEY-QNFLQWVKDQK 595
Rat 596 MFLVNVEQMKC--ASPIDMKASL-------------VLDF--TNSTC-----------------Y 626
Rat 627 IYKTIISVSVVSVLVVATVAFL------IYHFYFHLILIAG--CKKYSRGESIYDAFVIYSSQNE 683
Rat 684 DWVRNELVKNLEEGVPRFQLCLHYRDFIPGVAIAANIIQ--EGFHKSRKVIVVVSRHFIQSRWCI 746
Rat 747 FEYEIAQTWQFLSSRSGIIFIVLEKVEKSLLRQQVELYRLLSRNTY--LEWEDNALGRHIFWRRL 809
Rat 810 KKAL 813 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Tlr4 | NP_062051.2 | PLN00113 | 23..>456 | CDD:215061 | 111/474 (23%) |
LRR 1 | 54..75 | 7/17 (41%) | |||
leucine-rich repeat | 58..78 | CDD:275380 | 8/20 (40%) | ||
LRR 2 | 78..99 | 5/20 (25%) | |||
leucine-rich repeat | 79..102 | CDD:275380 | 7/22 (32%) | ||
LRR 3 | 102..123 | 5/20 (25%) | |||
leucine-rich repeat | 103..126 | CDD:275380 | 6/43 (14%) | ||
LRR 4 | 126..147 | 6/20 (30%) | |||
leucine-rich repeat | 127..150 | CDD:275380 | 7/27 (26%) | ||
LRR 5 | 150..171 | 9/25 (36%) | |||
leucine-rich repeat | 151..175 | CDD:275380 | 10/28 (36%) | ||
LRR 6 | 175..198 | 4/22 (18%) | |||
leucine-rich repeat | 176..204 | CDD:275380 | 5/27 (19%) | ||
LRR 7 | 204..224 | 6/20 (30%) | |||
leucine-rich repeat | 205..226 | CDD:275380 | 6/21 (29%) | ||
LRR 8 | 226..247 | 7/43 (16%) | |||
leucine-rich repeat | 256..310 | CDD:275380 | 11/53 (21%) | ||
LRR 9 | 372..381 | 5/8 (63%) | |||
leucine-rich repeat | 373..398 | CDD:275380 | 7/24 (29%) | ||
LRR 10 | 398..420 | 7/21 (33%) | |||
leucine-rich repeat | 399..421 | CDD:275380 | 7/21 (33%) | ||
LRR 11 | 421..442 | 5/23 (22%) | |||
leucine-rich repeat | 422..446 | CDD:275380 | 4/23 (17%) | ||
LRR 12 | 446..467 | 4/33 (12%) | |||
leucine-rich repeat | 447..470 | CDD:275380 | 5/35 (14%) | ||
LRR 13 | 470..491 | 8/156 (5%) | |||
leucine-rich repeat | 471..495 | CDD:275380 | 9/159 (6%) | ||
LRR_8 | 494..554 | CDD:404697 | 20/59 (34%) | ||
LRR 14 | 495..516 | 6/20 (30%) | |||
leucine-rich repeat | 496..519 | CDD:275380 | 6/22 (27%) | ||
LRR 15 | 519..540 | 7/20 (35%) | |||
leucine-rich repeat | 520..543 | CDD:275380 | 9/22 (41%) | ||
LRR 16 | 543..564 | 7/47 (15%) | |||
leucine-rich repeat | 544..567 | CDD:275380 | 9/49 (18%) | ||
TIR | 672..813 | CDD:214587 | 39/144 (27%) | ||
Toll-7 | NP_523797.1 | LRR_8 | 135..201 | CDD:290566 | |
leucine-rich repeat | 136..159 | CDD:275380 | |||
leucine-rich repeat | 160..190 | CDD:275380 | |||
LRR_8 | 189..259 | CDD:290566 | 4/6 (67%) | ||
leucine-rich repeat | 191..214 | CDD:275380 | |||
leucine-rich repeat | 215..248 | CDD:275380 | |||
LRR_RI | 247..501 | CDD:238064 | 66/265 (25%) | ||
LRR_8 | 247..308 | CDD:290566 | 18/55 (33%) | ||
leucine-rich repeat | 249..273 | CDD:275380 | 8/20 (40%) | ||
leucine-rich repeat | 274..297 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 297..356 | CDD:290566 | 10/58 (17%) | ||
leucine-rich repeat | 298..321 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 322..345 | CDD:275380 | 1/22 (5%) | ||
LRR_8 | 345..406 | CDD:290566 | 18/61 (30%) | ||
leucine-rich repeat | 346..371 | CDD:275380 | 5/24 (21%) | ||
leucine-rich repeat | 372..395 | CDD:275380 | 8/23 (35%) | ||
leucine-rich repeat | 396..419 | CDD:275380 | 6/32 (19%) | ||
LRR_8 | 419..478 | CDD:290566 | 13/58 (22%) | ||
leucine-rich repeat | 420..443 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 444..467 | CDD:275380 | 5/22 (23%) | ||
LRR_RI | 466..622 | CDD:238064 | 44/192 (23%) | ||
leucine-rich repeat | 468..488 | CDD:275380 | 4/19 (21%) | ||
LRR_8 | 491..549 | CDD:290566 | 16/87 (18%) | ||
leucine-rich repeat | 491..514 | CDD:275380 | 8/35 (23%) | ||
leucine-rich repeat | 515..536 | CDD:275380 | 4/34 (12%) | ||
leucine-rich repeat | 539..562 | CDD:275380 | 4/24 (17%) | ||
leucine-rich repeat | 563..585 | CDD:275380 | 7/21 (33%) | ||
leucine-rich repeat | 586..626 | CDD:275380 | 14/44 (32%) | ||
leucine-rich repeat | 627..653 | CDD:275380 | 6/25 (24%) | ||
LRRCT | 716..772 | CDD:214507 | 4/55 (7%) | ||
LRRNT | 796..830 | CDD:214470 | 0/33 (0%) | ||
leucine-rich repeat | 812..829 | CDD:275380 | 0/16 (0%) | ||
leucine-rich repeat | 833..854 | CDD:275380 | 1/20 (5%) | ||
LRR_8 | 853..913 | CDD:290566 | 20/59 (34%) | ||
leucine-rich repeat | 855..878 | CDD:275380 | 6/22 (27%) | ||
LRR_4 | 878..918 | CDD:289563 | 14/39 (36%) | ||
leucine-rich repeat | 879..902 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 903..926 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 927..953 | CDD:275380 | 4/25 (16%) | ||
TIR | 1098..1235 | CDD:214587 | 41/146 (28%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG4641 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D147327at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |