DRSC/TRiP Functional Genomics Resources

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Protein Alignment GRPR and Lkr

DIOPT Version :10

Sequence 1:NP_005305.1 Gene:GRPR / 2925 HGNCID:4609 Length:384 Species:Homo sapiens
Sequence 2:NP_647968.3 Gene:Lkr / 38622 FlyBaseID:FBgn0035610 Length:542 Species:Drosophila melanogaster


Alignment Length:319 Identity:94/319 - (29%)
Similarity:163/319 - (51%) Gaps:27/319 - (8%)


- Green bases have known domain annotations that are detailed below.


Human    40 LYVIPA--------VYGVIILIGLIGNITLIKIFCTVKSMRNVPNLFISSLALGDLLLLITCAPV 96
            ||..||        .||.|.::.:|||..:|.:..|.:.||.|.|::|::||..|:::.:.|.|.
  Fly    27 LYAAPAEIVALLSIFYGGISIVAVIGNTLVIWVVATTRQMRTVTNMYIANLAFADVIIGLFCIPF 91

Human    97 DASRYLADRWLFGRIGCKLIPFIQLTSVGVSVFTLTALSADRYKAIVRPMDIQASHALMKICLKA 161
            .....|...|......|...||:|..||.||||||||::.||::||:.|:..:.:..:.|..:..
  Fly    92 QFQAALLQSWNLPWFMCSFCPFVQALSVNVSVFTLTAIAIDRHRAIINPLRARPTKFVSKFIIGG 156

Human   162 AFIWIISMLLAIPEAVFSDLHPFHE--ESTNQTFISCAPY-PHSNELHPKIHSMASFLVF--YVI 221
              ||::::|.|:|.|:...:....|  ...|:|:....|: .:.|....::.|....|||  |::
  Fly   157 --IWMLALLFAVPFAIAFRVEELTERFRENNETYNVTRPFCMNKNLSDDQLQSFRYTLVFVQYLV 219

Human   222 PLSIISVYYYFIAKNLIQSAYNLPVEGNIHVKKQI---ESRKRLAKTVLVFVGLFAFCWLPNHVI 283
            |..:||..|..:|..|    :.....||....:.|   :::|::.|.:::.|.:|..||||   :
  Fly   220 PFCVISFVYIQMAVRL----WGTRAPGNAQDSRDITLLKNKKKVIKMLIIVVIIFGLCWLP---L 277

Human   284 YLYRSYHYSEVDTSMLHFVTSI--CARLLAFTNSCVNPFALYLLSKSFRKQFNTQLLCC 340
            .||...:.:..:.:..||::.:  |...||.:|||.|||...:.::.|:::||.:...|
  Fly   278 QLYNILYVTIPEINDYHFISIVWFCCDWLAMSNSCYNPFIYGIYNEKFKREFNKRFAAC 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GRPRNP_005305.1 7tmA_GRPR 41..333 CDD:320252 90/309 (29%)
TM helix 1 42..68 CDD:320252 9/33 (27%)
TM helix 2 75..101 CDD:320252 7/25 (28%)
TM helix 3 113..143 CDD:320252 17/29 (59%)
TM helix 4 155..175 CDD:320252 5/19 (26%)
TM helix 5 207..232 CDD:320252 9/26 (35%)
TM helix 6 257..287 CDD:320252 9/29 (31%)
TM helix 7 301..326 CDD:320252 10/26 (38%)
LkrNP_647968.3 7tmA_leucokinin-like 36..329 CDD:320515 87/301 (29%)
TM helix 1 37..63 CDD:320515 7/25 (28%)
TM helix 2 70..95 CDD:320515 7/24 (29%)
TM helix 3 108..138 CDD:320515 17/29 (59%)
TM helix 4 149..170 CDD:320515 6/22 (27%)
TM helix 5 205..234 CDD:320515 10/28 (36%)
TM helix 6 254..284 CDD:320515 10/32 (31%)
TM helix 7 297..322 CDD:320515 9/24 (38%)

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