Sequence 1: | XP_008758314.1 | Gene: | Sptbn2 / 29211 | RGDID: | 3751 | Length: | 2395 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001036722.1 | Gene: | Dys / 42327 | FlyBaseID: | FBgn0260003 | Length: | 3598 | Species: | Drosophila melanogaster |
Alignment Length: | 2975 | Identity: | 606/2975 - (20%) |
---|---|---|---|
Similarity: | 1053/2975 - (35%) | Gaps: | 921/2975 - (30%) |
- Green bases have known domain annotations that are detailed below.
Rat 58 LQDEREAVQKKTFTKWVNSHLARVTCR-VGDLYSDLRDGRNLLRLLEVLSGETLPKPTKGRMRIH 121
Rat 122 CLENVDKALQFLKEQKVHLENMGSHDIVDGNHRLTLGLVWTIILRFQIQDISVETEDNKEKKSAK 186
Rat 187 DALLLWCQMKTAGYPNVNVHNFTTSWRDGLAFNAIVHKHRPDLLDFESLKKCNAHYNLQNAFNLA 251
Rat 252 EKELGLTKLLDPEDVNVDQPDEKSIITYVATYYHYFSKMK------------------------- 291
Rat 292 ---------------------ALAVEGKRIGKVLDHAM-------EAEHLVEKYESLASELLQWI 328
Rat 329 EQTIVTLNDRQLANSLSGVQNQLQSFNSYRTVEKPPKFTEKGNLEVLLFTIQ----------SKL 383
Rat 384 RANNQKVYTPREGRLISD------------INKAWE--RLEKAEHERELALRTELIRQEKLEQLA 434
Rat 435 ARFDRKAAMRETWLSENQRLVSQDNFGLELAAVEAAVRKHEAIETDIVAYSGRVQAVDAVAAEL- 498
Rat 499 ----AAEHYHDIK-RIAA---RQNNVARLWDFLRE-----------MVAARRERLLL-------- 536
Rat 537 --------NLELQKVFQDLL----YLMDWMAEMKGRLQ-SQDLGK----HLAGVEDLLQ-LHELV 583
Rat 584 EADIAVQAERV-----------------RAVSASA-------LRFCDPGKEYRPCDPQLVSER-- 622
Rat 623 --------------------VATLEQSYEAL--------CELAATRRARLEESRRL-----WRFL 654
Rat 655 WEVGEAEAWVR----EQQHLLASAETGRDLTGVL--RLLNKHTALRGE-MSGRLGPLKLTLEQGQ 712
Rat 713 QLVAEGHPGANQASTRAAELQAQWERLEALAEERAQRLAQAA------SLYQFQADAN-DMEAW- 769
Rat 770 -LVDALRLVSSPEVGHDEFSTQALARQHRALEEEI------RAHRPTLDALREQAAALPPALSHT 827
Rat 828 PEVQGRVPTLEQHY-------------EELQARAGERARALE-----AA--LAFYTMLSEAGACG 872
Rat 873 LWVEEKEQWLNGL--ALPERLEDLEVVQQRFETLEPEMNALAARVTAVSDIAEQLLKASPPGKDR 935
Rat 936 IIGTQ-EQLNQRWQQFRSLADGKKAALTSALS-IQNYHLECTETQAWMRE--------------- 983
Rat 984 ---------------KTKVIESTQ--DLGNDLAGVLALQR-KLAGTERD---------LEAISAR 1021
Rat 1022 VGELTQEANALAAGHPAQAPAINTRLGEV------QTGWED-LRATMRRREESLGEARRLQDFLR 1079
Rat 1080 SLDDFQAWLGRTQTAVASEEGPATLPEAEALLAQHAALRGEVERAQSE--YSRLRTLGEEVTRDQ 1142
Rat 1143 --ADPQCLFLRQRLEALGTGWEELGRMWESRQGRLAQAHGFQGFLRDARQAEGVLSSQEYVLSHT 1205
Rat 1206 EMPGTLQAADAAIKKLEDFMSTMD-------------ANGERIRGLLEAGRQLVSKGNI-HAEKI 1256
Rat 1257 QEKADSIEKRHRKNQEAVQQLLGRLRDNREQQHFLQDCQELKL---WID----EKMLTAQDVSYD 1314
Rat 1315 EARNLHTKWQKHQAFMAELAANKDWLDKVDKEGRELTLEK----PELKVLVSEKLEDLHRRWDEL 1375
Rat 1376 -ETTTQAK---------ARSL---FDA--NRAELFA----------------------------- 1396
Rat 1397 -----QSCSA-LESWLESLQAQLH---SDDYGKDLTSV--------NILLKKQQMLEREM----A 1440
Rat 1441 VREKEVEAIQAQAKALAQEDQSAGEVERTSRAVEEKFRALCQPMKD--------------RCRRL 1491
Rat 1492 QASREQHQFHRDVEDEILWVTERLPMASSLEHGKD-LPSVQLLMKKNQTLQKEIQGHEPRIADL- 1554
Rat 1555 -KERQRTLGTAAAGPELAELQEMWKRLSHELELRGKRLE-EALRAQQFYRDAAEAEAWMGE---- 1613
Rat 1614 ------------------QELHMMGQEKAKDELSAQAE-----VKKHQVLEQALADYAQTIKQLA 1655
Rat 1656 ASSQDMIDHEHPESTRLTIRQAQVDKLYAGL----KELAGER---RERLQEH------------- 1700
Rat 1701 --LRLCQLRRELDDLEQWIQERE-VVAASHELGQDYEHVTMLRDK-FREFSRD-TSTIGQER--- 1757
Rat 1758 ------------------------VDSANALANGLIAG-------------GHAARATVAEWK-- 1783
Rat 1784 ----DSLNEAWADLLELL--DTRGQVLAAAYELQRFLHGARQALARVQHKQQQLPDGTGRDLNAA 1842
Rat 1843 EALQRRHCAYEHDIQALSTQVQQVQDDGLR-----LQKAYAGDKAEEIGRHMQAVAEAWAQLQ-- 1900
Rat 1901 ----GSSAARRQ---LLLDTTDKFRFFKAVRELMLWMDGINLQM----------DAQERPRDVSS 1948
Rat 1949 A-------------------------------DLVIKNQQGIKAEIEARADRFSACIDMGQEL-- 1980
Rat 1981 -LARNHYAAEEISEKLSQLQS------------RRQETAEKWQEK----------MDWLQLVLEV 2022
Rat 2023 LVFGRDAGMAEAWLCSQEPLVRSAELGCTVDEVESLIKRHEAFQKSAVAWEERFSA----LEKLT 2083
Rat 2084 A------------------LEERENEQKRKREEEERRKQ------PPTSEPMASQP--------- 2115
Rat 2116 -------------EGSLVDGQRV---------LDTAWDGTQSKLPPSTQAPSINGVCTDTESS-- 2156
Rat 2157 -QPLL---EQQRLEQSNVPEGPGSGTGDESSGPRGERQTLPRGPAPSPMPQSRSSE------SAH 2211
Rat 2212 VATLPARGAELSAQEQMEGTLCRKQEMEAFNKKAANRSWQNVYCVLRRGSLGFYKDARAASAGV- 2275
Rat 2276 PYHGEVPVSLAR-AQGSVAF--DYRKRKHVFKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAIATA 2337
Rat 2338 SSASGEPEEPVVPSA---SRGLTRAM--TMPPVSQPEGSIVLRSKDGRER 2382 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sptbn2 | XP_008758314.1 | CH | 68..166 | CDD:214479 | 51/98 (52%) |
CH | 184..287 | CDD:237981 | 37/102 (36%) | ||
Spectrin | 312..421 | CDD:278843 | 26/132 (20%) | ||
Spectrin | 436..529 | CDD:278843 | 18/112 (16%) | ||
SPEC | 541..753 | CDD:238103 | 65/287 (23%) | ||
SPEC | 756..965 | CDD:238103 | 46/240 (19%) | ||
SPEC | 968..1179 | CDD:238103 | 53/263 (20%) | ||
SPEC | 1181..1390 | CDD:238103 | 46/248 (19%) | ||
SPEC | 1391..1595 | CDD:238103 | 46/271 (17%) | ||
SPEC | 1596..1808 | CDD:238103 | 51/311 (16%) | ||
SPEC | 1809..2017 | CDD:238103 | 48/287 (17%) | ||
SPEC | 2025..>2082 | CDD:197544 | 11/60 (18%) | ||
PH_beta_spectrin | 2228..2331 | CDD:269975 | 21/106 (20%) | ||
PH | 2249..2331 | CDD:278594 | 19/85 (22%) | ||
Dys | NP_001036722.1 | CH | 13..111 | CDD:278723 | 52/98 (53%) |
CH | 129..225 | CDD:278723 | 36/101 (36%) | ||
SPEC | 312..525 | CDD:238103 | 50/245 (20%) | ||
SbcC | <325..957 | CDD:223496 | 137/678 (20%) | ||
Smc | <816..1591 | CDD:224117 | 171/882 (19%) | ||
SPEC | 1174..1365 | CDD:238103 | 43/245 (18%) | ||
SPEC | 1289..1485 | CDD:295325 | 38/217 (18%) | ||
SPEC | 2369..2576 | CDD:238103 | 41/219 (19%) | ||
SPEC | 2477..2714 | CDD:238103 | 56/281 (20%) | ||
WW | 2852..2882 | CDD:238122 | |||
EF-hand_2 | 2883..2997 | CDD:286194 | |||
EF-hand_3 | 3001..3100 | CDD:286195 | |||
ZZ_dystrophin | 3110..3158 | CDD:239074 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |