Sequence 1: | NP_062034.2 | Gene: | Cdh22 / 29182 | RGDID: | 2321 | Length: | 813 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001036368.2 | Gene: | CadN2 / 35071 | FlyBaseID: | FBgn0262018 | Length: | 1799 | Species: | Drosophila melanogaster |
Alignment Length: | 583 | Identity: | 167/583 - (28%) |
---|---|---|---|
Similarity: | 274/583 - (46%) | Gaps: | 84/583 - (14%) |
- Green bases have known domain annotations that are detailed below.
Rat 68 VVEEYTGTEPLYVGKIHSDSDEGDGTIK--YTISGEG------AGTIFLIDELTGDIHATERLDR 124
Rat 125 EQ---KTFYTLRAQARDRATNRLLEPESEFIIKVQDINDSEPRFLHGPYIGSVAELSPTGTSVMQ 186
Rat 187 VMASDADDPTYGSSARLVYSV-------LDGEHHFTVDPKTGVIRTAVPDLDRESQERYEVVIQA 244
Rat 245 TDMAGQLGGLSGSTTVTIVVTDVNDNPPRFPQKMYQFSIQES-------APIGTAVGRVKAEDSD 302
Rat 303 VGENTDMTYHLREESGSGGDAFKVTTDSDTQEAIIVVQKHLDFESQQVHTVVLEALNKFVDPRFA 367
Rat 368 DLGTFRDQ-------------------AIVRVAVTDV-DEPPEFRPPSGLLEVQEDAQVGSLVGV 412
Rat 413 VTARDPD-AANRPVRYAIDRDSDLEQIFDIDADTGAIVTGKGLDRETAGWHNITVLAMEADNHAQ 476
Rat 477 LSRASLRIRILDVNDNPPELATPYEAAVCEDAKPGQLIQTISVVDRDEPQGGH--RFYFRLVP-- 537
Rat 538 ----EEPSNPHFSLLDIEDNTAAVHTQHVGFNRQEQDVFLLPILVVDSGPPTLSSTGTLTIRI 596 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Cdh22 | NP_062034.2 | Cadherin_repeat | 80..160 | CDD:206637 | 21/90 (23%) |
Cadherin_repeat | 169..270 | CDD:206637 | 42/107 (39%) | ||
Cadherin_repeat | 279..387 | CDD:206637 | 27/134 (20%) | ||
Cadherin_repeat | 398..492 | CDD:206637 | 31/94 (33%) | ||
Cadherin_repeat | 499..597 | CDD:206637 | 27/106 (25%) | ||
Cadherin_C | 645..804 | CDD:395833 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 696..726 | ||||
CadN2 | NP_001036368.2 | Cadherin_repeat | 41..132 | CDD:206637 | |
Cadherin_repeat | 140..248 | CDD:206637 | 25/103 (24%) | ||
Cadherin_repeat | 256..359 | CDD:206637 | 41/106 (39%) | ||
Cadherin_repeat | 379..481 | CDD:206637 | 26/124 (21%) | ||
Cadherin_repeat | 489..586 | CDD:206637 | 31/97 (32%) | ||
Cadherin_repeat | 594..703 | CDD:206637 | 27/105 (26%) | ||
Cadherin_repeat | 724..801 | CDD:206637 | |||
EGF_CA | 977..1010 | CDD:238011 | |||
LamG | 1013..1198 | CDD:238058 | |||
EGF_2 | <1233..1259 | CDD:285248 | |||
Laminin_G_2 | 1293..1428 | CDD:280389 | |||
EGF_CA | 1497..1535 | CDD:238011 | |||
Cadherin_C | 1583..1719 | CDD:279398 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 69 | 1.000 | Domainoid score | I9369 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24027 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 4.010 |