Sequence 1: | NP_001012755.1 | Gene: | Cdh7 / 29162 | RGDID: | 1306856 | Length: | 785 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001036368.2 | Gene: | CadN2 / 35071 | FlyBaseID: | FBgn0262018 | Length: | 1799 | Species: | Drosophila melanogaster |
Alignment Length: | 746 | Identity: | 213/746 - (28%) |
---|---|---|---|
Similarity: | 340/746 - (45%) | Gaps: | 157/746 - (21%) |
- Green bases have known domain annotations that are detailed below.
Rat 66 LYVGKLHSDVDKGDGFIKYILSGEG------ASSIFIIDENTGDIHATKRLDREE-----QAYYT 119
Rat 120 LRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPT 184
Rat 185 YGNSARVVYSILQ-------GQPYFSVEPKTGVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGL 242
Rat 243 SGTTSVTVTLTDVNDNPPRFPRRSY-----QYNG---PESLPVASVVARIKAADADIGVNAEMEY 299
Rat 300 KIVDGDGLGIFKISPDKDTQ-EGIITIQKELDFE---AKTSYTLRIEAANRDADPRFLSLGP-FS 359
Rat 360 DT-----TTVKIIVEDV-DEPPVFSSPLYPMEVSEATQVGHIIGTVAAHDPD-SSNSPVRYSIDR 417
Rat 418 NTDLERYFNIDANSGIITTAKSLDRETNPVHNITVLAMESQNPSQVGRGYVAITILDINDNAPEF 482
Rat 483 AMDYETTVCENAQPGQVIQKISAIDKDE--PSNGHQFYFSLTTDMANNLNSSLK-------DNKD 538
Rat 539 NTASILTRRNGFRRQEQSVYYLPIFIVDNGSPSLSSTNTLTIRVCDCDADG--------IAQTCN 595
Rat 596 AEAYILPAG------------------------------LSTGALIAILACVLTLLVLILLIVTM 630
Rat 631 K---RRKKEPLIFDEERDIRENIVRYDDEGGGEEDTEAFDMAALRNLNVVRDTKTRRDVTPE-IQ 691
Rat 692 FLSRPTFKNIPDNVIFREFIWERLKEADVDP 722 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Cdh7 | NP_001012755.1 | CA | 73..151 | CDD:214520 | 29/88 (33%) |
Cadherin_repeat | 157..258 | CDD:206637 | 39/107 (36%) | ||
Cadherin_repeat | 266..373 | CDD:206637 | 27/125 (22%) | ||
Cadherin_repeat | 382..478 | CDD:206637 | 30/96 (31%) | ||
Cadherin_repeat | 486..584 | CDD:206637 | 34/106 (32%) | ||
Cadherin_C | 639..777 | CDD:279398 | 24/85 (28%) | ||
CadN2 | NP_001036368.2 | Cadherin_repeat | 41..132 | CDD:206637 | |
Cadherin_repeat | 140..248 | CDD:206637 | 29/93 (31%) | ||
Cadherin_repeat | 256..359 | CDD:206637 | 38/106 (36%) | ||
Cadherin_repeat | 379..481 | CDD:206637 | 25/114 (22%) | ||
Cadherin_repeat | 489..586 | CDD:206637 | 30/97 (31%) | ||
Cadherin_repeat | 594..703 | CDD:206637 | 35/110 (32%) | ||
Cadherin_repeat | 724..801 | CDD:206637 | 23/117 (20%) | ||
EGF_CA | 977..1010 | CDD:238011 | |||
LamG | 1013..1198 | CDD:238058 | |||
EGF_2 | <1233..1259 | CDD:285248 | |||
Laminin_G_2 | 1293..1428 | CDD:280389 | |||
EGF_CA | 1497..1535 | CDD:238011 | |||
Cadherin_C | 1583..1719 | CDD:279398 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 130 | 1.000 | Domainoid score | I5067 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR24027 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 4.010 |