DRSC/TRiP Functional Genomics Resources

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Protein Alignment GRM6 and grm6b

DIOPT Version :10

Sequence 1:NP_000834.2 Gene:GRM6 / 2916 HGNCID:4598 Length:877 Species:Homo sapiens
Sequence 2:NP_001073489.2 Gene:grm6b / 565450 ZFINID:ZDB-GENE-021120-2 Length:909 Species:Danio rerio


Alignment Length:869 Identity:643/869 - (73%)
Similarity:742/869 - (85%) Gaps:16/869 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     6 RAREPLLVALLPLAWLAQAGL---ARAAG------SVRLAGGLTLGGLFPVHARGAAGRACGQLK 61
            ||.:|.:.:|:.:.|:...|.   ::||.      |:::.|.:|||||||||:||.||..||::|
Zfish    22 RAPKPHVGSLIHIMWILTMGFTPESQAASSDTQPHSIKIEGDITLGGLFPVHSRGPAGIPCGEVK 86

Human    62 KEQGVHRLEAMLYALDRVNADPELLPGVRLGARLLDTCSRDTYALEQALSFVQALIRGRGDGDEV 126
            ||:|:||:||||||||::|:||:|||.:.||||:|||||||||||||:|:||||||:    .|..
Zfish    87 KEKGIHRMEAMLYALDQINSDPDLLPNITLGARILDTCSRDTYALEQSLTFVQALIQ----KDNS 147

Human   127 GVRCPGGVPPLRPAPPERVVAVVGASASSVSIMVANVLRLFAIPQISYASTAPELSDSTRYDFFS 191
            .|||..|.||:.| .|||||.|:||||||||||||||||||||||||||||||||||:.||||||
Zfish   148 DVRCSNGEPPIIP-KPERVVGVIGASASSVSIMVANVLRLFAIPQISYASTAPELSDNNRYDFFS 211

Human   192 RVVPPDSYQAQAMVDIVRALGWNYVSTLASEGNYGESGVEAFVQISREAGGVCIAQSIKIPREPK 256
            |||||||:|||||||||:|:|||||||||||||||||||:||:||||||||:||||:|||||||:
Zfish   212 RVVPPDSFQAQAMVDIVKAMGWNYVSTLASEGNYGESGVDAFIQISREAGGLCIAQAIKIPREPR 276

Human   257 PGEFSKVIRRLMETPNARGIIIFANEDDIRRVLEAARQANLTGHFLWVGSDSWGAKTSPILSLED 321
            ||||.|:|:|||||.||||:|||||||||:||||||::||||||||:|||||||||.||||:.||
Zfish   277 PGEFDKIIKRLMETSNARGVIIFANEDDIKRVLEAAKRANLTGHFLFVGSDSWGAKISPILNQED 341

Human   322 VAVGAITILPKRASIDGFDQYFMTRSLENNRRNIWFAEFWEENFNCKLTSSGTQSDDSTRKCTGE 386
            ||.||:|||||||||:||||||.||||||||||||||||||::|.||||..|.:.|...||||||
Zfish   342 VAEGAVTILPKRASIEGFDQYFTTRSLENNRRNIWFAEFWEDDFKCKLTRPGIRGDGGLRKCTGE 406

Human   387 ERIGRDSTYEQEGKVQFVIDAVYAIAHALHSMHQALCPGHTGLCPAMEPTDGRMLLQYIRAVRFN 451
            |||||||.||||||||||||||||:||||||||..||||..|:|..|:|.||||||.|||||.||
Zfish   407 ERIGRDSGYEQEGKVQFVIDAVYAMAHALHSMHIDLCPGSMGVCDKMDPVDGRMLLTYIRAVNFN 471

Human   452 GSAGTPVMFNENGDAPGRYDIFQYQATNGSASSGGYQAVGQWAETLRLDVEALQWSGDPHEVPSS 516
            |||||.|||||||||||||||||||.:|  .::.||:.:|||...|||..|.:||||....||.|
Zfish   472 GSAGTGVMFNENGDAPGRYDIFQYQLSN--TTNPGYKLIGQWTNHLRLSAEDMQWSGGEKLVPDS 534

Human   517 LCSLPCGPGERKKMVKGVPCCWHCEACDGYRFQVDEFTCEACPGDMRPTPNHTGCRPTPVVRLSW 581
            :||.||..||||:||||||||||||.||||:|.:|||.|:.||.|||||||.|.|||||:::|.|
Zfish   535 VCSFPCESGERKRMVKGVPCCWHCELCDGYQFLLDEFNCDMCPFDMRPTPNRTACRPTPIIKLEW 599

Human   582 SSPWAAPPLLLAVLGIVATTTVVATFVRYNNTPIVRASGRELSYVLLTGIFLIYAITFLMVAEPG 646
            |||||..|:.||||||:|||.|:|||:|:|:|||||||||||||||||||||||.|||||:||||
Zfish   600 SSPWAIIPVFLAVLGILATTGVIATFIRFNDTPIVRASGRELSYVLLTGIFLIYLITFLMIAEPG 664

Human   647 AAVCAARRLFLGLGTTLSYSALLTKTNRIYRIFEQGKRSVTPPPFISPTSQLVITFSLTSLQVVG 711
            ..|||.|||.||||..:||||:|||||||||||||||:|||||.||||||||:|||.|.|:|::|
Zfish   665 TVVCAFRRLLLGLGMCISYSAMLTKTNRIYRIFEQGKKSVTPPKFISPTSQLIITFILISVQLLG 729

Human   712 MIAWLGARPPHSVIDYEEQRTVDPEQARGVLKCDMSDLSLIGCLGYSLLLMVTCTVYAIKARGVP 776
            :..|.|..|||:.:|::|.|..:||.|||:||||||||||||||.||:.|||||||||||:||||
Zfish   730 IFIWFGVVPPHTNVDFDELRPPNPEFARGILKCDMSDLSLIGCLSYSMGLMVTCTVYAIKSRGVP 794

Human   777 ETFNEAKPIGFTMYTTCIIWLAFVPIFFGTAQSAEKIYIQTTTLTVSLSLSASVSLGMLYVPKTY 841
            ||||||||||||||||||||||||||||||:||.||::|||||||||:||||:|||||||:||.|
Zfish   795 ETFNEAKPIGFTMYTTCIIWLAFVPIFFGTSQSTEKMFIQTTTLTVSMSLSATVSLGMLYIPKVY 859

Human   842 VILFHPEQNVQKRKRSLKATSTVA 865
            ||:|||||||||||||.||.:..|
Zfish   860 VIIFHPEQNVQKRKRSFKAVAQAA 883

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GRM6NP_000834.2 PBP1_mGluR_groupIII 45..506 CDD:380599 354/460 (77%)
NCD3G 514..564 CDD:462210 35/49 (71%)
7tmC_mGluR6 584..856 CDD:320569 213/271 (79%)
TM helix 1 584..609 CDD:320569 17/24 (71%)
TM helix 2 621..642 CDD:320569 19/20 (95%)
TM helix 3 651..673 CDD:320569 15/21 (71%)
TM helix 4 699..715 CDD:320569 7/15 (47%)
TM helix 5 747..770 CDD:320569 19/22 (86%)
TM helix 6 779..804 CDD:320569 24/24 (100%)
TM helix 7 814..839 CDD:320569 20/24 (83%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 856..877 5/10 (50%)
grm6bNP_001073489.2 PBP1_mGluR_groupIII 58..524 CDD:380599 360/472 (76%)
NCD3G 532..582 CDD:462210 35/49 (71%)
7tmC_mGluR_group3 602..872 CDD:320413 211/269 (78%)
TM helix 1 602..627 CDD:320413 17/24 (71%)
TM helix 2 639..660 CDD:320413 19/20 (95%)
TM helix 3 669..693 CDD:320413 17/23 (74%)
TM helix 4 715..735 CDD:320413 10/19 (53%)
TM helix 5 765..791 CDD:320413 22/25 (88%)
TM helix 6 799..822 CDD:320413 22/22 (100%)
TM helix 7 832..857 CDD:320413 20/24 (83%)

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