DRSC/TRiP Functional Genomics Resources

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Protein Alignment GRM6 and grm8l

DIOPT Version :10

Sequence 1:NP_000834.2 Gene:GRM6 / 2916 HGNCID:4598 Length:877 Species:Homo sapiens
Sequence 2:XP_017946013.2 Gene:grm8l / 100489237 XenbaseID:XB-GENE-953825 Length:886 Species:Xenopus tropicalis


Alignment Length:837 Identity:646/837 - (77%)
Similarity:730/837 - (87%) Gaps:7/837 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    29 AAGSVRLAGGLTLGGLFPVHARGAAGRACGQLKKEQGVHRLEAMLYALDRVNADPELLPGVRLGA 93
            |..|:::.|.:||||||||||:|.||..||::|||.|||||||||||||::|.||||||.:.|||
 Frog    26 AQHSIKIDGDITLGGLFPVHAKGPAGTPCGEVKKEAGVHRLEAMLYALDQINGDPELLPNLTLGA 90

Human    94 RLLDTCSRDTYALEQALSFVQALIRGRGDGDEVGVRCPGGVPPLRPAPPERVVAVVGASASSVSI 158
            |:|||||||||||||:|:||||||:    .|...:||..|.||:. :.|||||.|:|||||||||
 Frog    91 RILDTCSRDTYALEQSLTFVQALIQ----KDTSDIRCSNGDPPIL-SRPERVVGVIGASASSVSI 150

Human   159 MVANVLRLFAIPQISYASTAPELSDSTRYDFFSRVVPPDSYQAQAMVDIVRALGWNYVSTLASEG 223
            |||||||||:|||||||||||||||:.|||||||||||||||||||||||:||||||||||||||
 Frog   151 MVANVLRLFSIPQISYASTAPELSDNNRYDFFSRVVPPDSYQAQAMVDIVKALGWNYVSTLASEG 215

Human   224 NYGESGVEAFVQISREAGGVCIAQSIKIPREPKPGEFSKVIRRLMETPNARGIIIFANEDDIRRV 288
            ||||||||||:|||||||||||||||||||||:||||.||||||:|||||||||||||||||:||
 Frog   216 NYGESGVEAFMQISREAGGVCIAQSIKIPREPRPGEFDKVIRRLLETPNARGIIIFANEDDIKRV 280

Human   289 LEAARQANLTGHFLWVGSDSWGAKTSPILSLEDVAVGAITILPKRASIDGFDQYFMTRSLENNRR 353
            |||:::||.|||||||||||||:||||:|.||:||.||:|||||||||:||||||.:|:||||||
 Frog   281 LEASQRANQTGHFLWVGSDSWGSKTSPVLGLEEVAEGAVTILPKRASIEGFDQYFTSRTLENNRR 345

Human   354 NIWFAEFWEENFNCKLTSSGTQSDDSTRKCTGEERIGRDSTYEQEGKVQFVIDAVYAIAHALHSM 418
            |||||||||::|.|:||.|..:.:|..|||||.|||.:||.||||||||||||||||:|||||:|
 Frog   346 NIWFAEFWEDDFKCRLTRSAARPEDPRRKCTGGERIAKDSAYEQEGKVQFVIDAVYAMAHALHNM 410

Human   419 HQALCPGHTGLCPAMEPTDGRMLLQYIRAVRFNGSAGTPVMFNENGDAPGRYDIFQYQATNGSAS 483
            |..|||||:|:|..|:|.:||:||:||..|.|||||||||||||||||||||||||||..|.||.
 Frog   411 HVDLCPGHSGVCDKMDPIEGRLLLRYIHRVNFNGSAGTPVMFNENGDAPGRYDIFQYQMANDSAP 475

Human   484 SGGYQAVGQWAETLRLDVEALQWSGDPHEVPSSLCSLPCGPGERKKMVKGVPCCWHCEACDGYRF 548
            |  |:.:|||.|.|||.:|.:||||...::|||:|||||.||||||||||||||||||.||||:|
 Frog   476 S--YRVIGQWTEYLRLSIEEMQWSGGQSDIPSSVCSLPCQPGERKKMVKGVPCCWHCELCDGYQF 538

Human   549 QVDEFTCEACPGDMRPTPNHTGCRPTPVVRLSWSSPWAAPPLLLAVLGIVATTTVVATFVRYNNT 613
            |:|:|||:.||.||||..|.|.||.||:::|.|:|.||..||.||::||::|..||.|.||:|:|
 Frog   539 QLDDFTCQLCPFDMRPNENRTACRATPIIKLEWTSAWAVLPLFLAIVGILSTLFVVGTLVRFNDT 603

Human   614 PIVRASGRELSYVLLTGIFLIYAITFLMVAEPGAAVCAARRLFLGLGTTLSYSALLTKTNRIYRI 678
            ||||||||||||||||||||:|||||||:.|||.||||.||||||||..:||:||||||||||||
 Frog   604 PIVRASGRELSYVLLTGIFLMYAITFLMMGEPGVAVCALRRLFLGLGMCISYAALLTKTNRIYRI 668

Human   679 FEQGKRSVTPPPFISPTSQLVITFSLTSLQVVGMIAWLGARPPHSVIDYEEQRTVDPEQARGVLK 743
            |||||||||||.||||.|||||||||..:|:||...||...||||.||||||||.:||.||||||
 Frog   669 FEQGKRSVTPPRFISPASQLVITFSLIGVQLVGTSVWLAVLPPHSFIDYEEQRTPNPENARGVLK 733

Human   744 CDMSDLSLIGCLGYSLLLMVTCTVYAIKARGVPETFNEAKPIGFTMYTTCIIWLAFVPIFFGTAQ 808
            ||||||||:.||.||:||||||||||:|||||||.||||||||||||||||:|||||||||||||
 Frog   734 CDMSDLSLVSCLMYSILLMVTCTVYAVKARGVPENFNEAKPIGFTMYTTCIVWLAFVPIFFGTAQ 798

Human   809 SAEKIYIQTTTLTVSLSLSASVSLGMLYVPKTYVILFHPEQNVQKRKRSLKATSTVA 865
            |||||||||||||||:|||||||||||||||.|||:|||||||||||||.||.:|.|
 Frog   799 SAEKIYIQTTTLTVSMSLSASVSLGMLYVPKVYVIIFHPEQNVQKRKRSFKAVATAA 855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GRM6NP_000834.2 PBP1_mGluR_groupIII 45..506 CDD:380599 354/460 (77%)
NCD3G 514..564 CDD:462210 40/49 (82%)
7tmC_mGluR6 584..856 CDD:320569 222/271 (82%)
TM helix 1 584..609 CDD:320569 12/24 (50%)
TM helix 2 621..642 CDD:320569 19/20 (95%)
TM helix 3 651..673 CDD:320569 16/21 (76%)
TM helix 4 699..715 CDD:320569 9/15 (60%)
TM helix 5 747..770 CDD:320569 18/22 (82%)
TM helix 6 779..804 CDD:320569 23/24 (96%)
TM helix 7 814..839 CDD:320569 23/24 (96%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 856..877 6/10 (60%)
grm8lXP_017946013.2 PBP1_mGluR_groupIII 30..496 CDD:380599 360/472 (76%)
NCD3G 504..554 CDD:462210 40/49 (82%)
7tmC_mGluR_group3 574..844 CDD:320413 220/269 (82%)
TM helix 1 574..599 CDD:320413 12/24 (50%)
TM helix 2 611..632 CDD:320413 19/20 (95%)
TM helix 3 641..665 CDD:320413 18/23 (78%)
TM helix 4 687..707 CDD:320413 12/19 (63%)
TM helix 5 737..763 CDD:320413 20/25 (80%)
TM helix 6 771..794 CDD:320413 21/22 (95%)
TM helix 7 804..829 CDD:320413 23/24 (96%)

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