DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vnn1 and CG32751

DIOPT Version :10

Sequence 1:NP_001020794.1 Gene:Vnn1 / 29142 RGDID:1310075 Length:512 Species:Rattus norvegicus
Sequence 2:NP_001284927.1 Gene:CG32751 / 318189 FlyBaseID:FBgn0052751 Length:525 Species:Drosophila melanogaster


Alignment Length:558 Identity:148/558 - (26%)
Similarity:230/558 - (41%) Gaps:128/558 - (22%)


- Green bases have known domain annotations that are detailed below.


  Rat     1 MSLSRWLAWAAAFSVFC-----VLKVS---SL---DTFLAAVYEHAVILPKVTLLPVSHSEALAL 54
            |:.:.|     .|.:||     :|.:|   ||   |.:.|.|.|..   |.              
  Fly     1 MAKNYW-----GFFLFCLALGLMLNLSQQASLFKRDFYTAGVVEFE---PS-------------- 43

  Rat    55 MNQNLDLLEGAILSAAKQGA---HIIVTPEDGIYGVQFTRDTIYPYLEDIPDPQVNWIPC-DNPE 115
             |:..|.|.|.:.....|.|   .|||.||..:.....|  |..|.    |:.|:|  || .:| 
  Fly    44 -NELSDNLAGYLEIIQSQNATSTDIIVFPESTLNSAGST--TFVPN----PEDQIN--PCLSDP- 98

  Rat   116 RFGSTPVQE---RLSCLAKNNSIYVVANMGDKKPCN--TSDSH-CPPDGRFQYNTDVVFDSRGKL 174
              .:|..:|   .|||.|:|.|.|:|.|:.:|:.|.  ..|:. |..:|...:||:||||.:|.:
  Fly    99 --NATYYEEFLVTLSCAARNASKYIVINLTEKQKCEDIPEDTRPCASNGLNVFNTNVVFDRQGVV 161

  Rat   175 VARYHKQNLFMGEEQFNAPPEPEVVTFDTPFG-KFGIFTCFDILFHDPAVTLVTEFQVDTILFPT 238
            |:||.|.:|: ||.: |:...||:.||:|.|| .||.|.||||||:.||..|:.|..:...::|.
  Fly   162 VSRYRKVHLY-GEPK-NSTFLPELSTFETDFGVTFGHFICFDILFYTPAHQLIVEQGITDFVYPA 224

  Rat   239 AWMDVLPHLA--------AIEFHSAWAIGMGVNFLAANLHIPLRRMTGSGIYAPDSPRAFHYDR- 294
            .|...||.|.        |::....|:....||.|||....|:...:|||||...|.......| 
  Fly   225 MWFSQLPFLTVNGIFSSKAVQIQLGWSYANNVNLLAAGASDPIVGNSGSGIYHGRSGSLRSVMRQ 289

  Rat   295 KTQEGKLLLAQLDSHPSHSPVNWTSYASSVEAPPTEKEEFRSFV-----------FFDEFTFVEL 348
            ::.|..:.:|::..:               .|....|.:.:..|           :.:.||..||
  Fly   290 ESGERSIYVARVPKY---------------RAKRRMKRDLKRQVATSSSFNIKRDYLENFTSEEL 339

  Rat   349 K---GITGNYT--VCQNDLCCHLSY------QMSEKRADEVYALGAFDGLHT---VEGQYHLQIC 399
            |   |..||.:  :|....|||...      :.|...:...|.:|.::|...   ::..| ::.|
  Fly   340 KIDAGKIGNLSQNLCHGGFCCHFDLAWRSLGKPSRNTSHYSYRVGIYEGWRNEKRLDVNY-IRNC 403

  Rat   400 ILLKCKTTNLRTCGS---SVDTASTRFEMFSLSGTFGTR---YVFPEVLLSE-VKLAPGEFQ--- 454
            .:..|...::..||.   .:......|....:..|:...   .:||:.||.. :.|.|.:|:   
  Fly   404 GVFTCSGNSIDDCGQLLPDIQRPLVTFTHVEIRVTYPQSREFLLFPDTLLDNLLPLEPKQFEWSQ 468

  Rat   455 --VLSDGRLV------SLKPTSGPVLTVGLFGRLYEKD 484
              :..:...|      ||:...  :||.|::|..|..:
  Fly   469 KRISEESHQVRFALRKSLEVKH--LLTFGIYGNYYNNE 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vnn1NP_001020794.1 biotinidase_like 27..324 CDD:143591 97/316 (31%)
Vanin_C 338..484 CDD:465946 39/188 (21%)
CG32751NP_001284927.1 biotinidase_like 33..329 CDD:143591 100/341 (29%)
Vanin_C 324..503 CDD:465946 38/181 (21%)

Return to query results.
Submit another query.