DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dcn and CG18095

DIOPT Version :9

Sequence 1:NP_077043.1 Gene:Dcn / 29139 RGDID:61895 Length:354 Species:Rattus norvegicus
Sequence 2:NP_001188805.1 Gene:CG18095 / 34823 FlyBaseID:FBgn0028872 Length:564 Species:Drosophila melanogaster


Alignment Length:287 Identity:80/287 - (27%)
Similarity:131/287 - (45%) Gaps:29/287 - (10%)


- Green bases have known domain annotations that are detailed below.


  Rat    76 PDTTLLDLQNNKITEIKEGAFKNLKDLHTLILVNNKISKISPEAFKPLVKLERLYLSKNHLK--E 138
            |....|||:.|:|::|:..:|..|..|..|.|..|:::.|....|:.|.:|..|.|..|.::  |
  Fly   135 PQLQQLDLRYNRISQIENDSFDGLSHLKHLYLNGNQLAHIDGSFFRGLHRLSSLSLQHNRIEFIE 199

  Rat   139 LPEKLPKT-LQELRLHDNEITKLKKSVFNGLNRMIVIELGGNPLKNSGIE------NGALQGMKG 196
            :......| |:.|||..|.::.|:.....||.|::.:.|..|.|:.  :|      |..||.: .
  Fly   200 MDSFESNTHLRSLRLDQNLLSSLQFLSQRGLARLVHLNLSSNLLQK--LEPFVFSKNFELQDL-D 261

  Rat   197 LGYIRISDTNITAIPQGLPTSISELHLDGNKIAKVDAASLKGMSNLSKLGLSFNSITVVENGSLA 261
            |.|..|:..|..|: .|| .|:..|::..|.:.|:...||..:..|.:|.:|||.:|.:.:....
  Fly   262 LSYNNITKLNKEAL-SGL-DSLERLNISHNYVDKIYDESLDSLIALLQLDISFNLLTTLPDNLFH 324

  Rat   262 NVPHLRELHLDNNKLLRVPAGLA-QHKYVQVVYLHNNNISEVGQHDFCLPSYQTRKTSYTAVSLY 325
            ....|.|:.|.|||:..:.:.:. ...:::.:.|..|.||:....|...||. .|.|.|  |.|.
  Fly   325 FNTQLEEIILANNKIEEISSQMMFNQNHLRYIKLSGNAISDAAFLDRLSPSV-NRFTLY--VDLS 386

  Rat   326 SNPV-----------RYWQIHPHTFRC 341
            ||.:           ||..:..:.:.|
  Fly   387 SNRLKSLNLSSLLHFRYINLADNNWSC 413

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
DcnNP_077043.1 LRRNT 48..80 CDD:214470 1/3 (33%)