Protein Alignment Rbm17 and Spf45

DIOPT Version :9

• Sequence 1: NP_001013076.1
• Gene: Rbm17 / 291295
• RGDID: 1311208
• Length: 405
• Species: Rattus norvegicus
• Sequence 2: NP_001036426.1
• Gene: Spf45 / 3355114
• FlyBaseID: FBgn0086683
• Length: 403
• Species: Drosophila melanogaster
• Alignment Length: 464
• Identity: 161/464 - (34%)
• Similarity: 218/464 - (46%)
• Gaps: 125/464 - (26%)

  Rat     1 MSLYDDLGVETSDSKTEGWSKNFKLLQSQLQVKKAALTQAKSQRTKQSTVLAPVIDLKRGGSSDD 65
            |.|||.:......|:.:|||...|:||:||.||.|.          :..::.||::|:....:|.
  Fly     1 MDLYDGIDTRARSSQIDGWSSGIKMLQTQLAVKMAV----------KKPLMTPVVNLRSKRLADP 55

  Rat    66 RQIVDTPPHVAAGLKDPVPSGFSAGEVL-------IPLADEYDPMFPNDYEKVVKRQREERQRQR 123
            ......|  :...:..|:.||.:...:|       ..:||||||..||:|||:.::.....:.:.
  Fly    56 EVTCFAP--ITTVVSKPLISGKALPSILERINRGDWDVADEYDPQRPNEYEKLKEKSNGSDKNRA 118

  Rat   124 ELERQKEIEEREKRRK----DRHE------------ASGFSRRPDPDSDEDEDYERERRKRSMGG 172
            .:..:::.:::||.||    .|.|            .|||..|   .:|:|............||
  Fly   119 GVSDREDRDDKEKDRKRGRVGRREFYRDEVSAPNLKLSGFGHR---QNDDDMYLPSPGLVAKQGG 180

  Rat   173 AAIAPPTSL----VEKDKELPRDFPYEEDSRPRSQSSKAAIPPPVYEEPDRPRSPTGPSNSFLAN 233
            |.||||.||    ::...|.....||...|
  Fly   181 ATIAPPPSLQEMSIDSGCEATNTMPYSASS----------------------------------- 210

  Rat   234 MGGTVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKII-------------------- 278
                ||.|||.||||::||||||.|||::.||.|||||||||:||
  Fly   211 ----VAAKIMAKYGFKDGQGLGKSEQGMAIALQVEKTSKRGGRIIHEKDVFLPPLALSPPSIGSQ 271

  Rat   279 ---------------VGDATEKGESQDASKKSDSNPLTEILKCPTKVVLLRNMVGAGEVDEDLEV 328
                           |..|.|.|:.        ...:|||:|.|:||||||||||.|:|||:||.
  Fly   272 IGTSPSHKAMPPPQMVDTAAESGDI--------GYSITEIMKSPSKVVLLRNMVGPGDVDEELEP 328

  Rat   329 ETKEECE-KYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYN 392
            |.|:||. |||:|...:|.|..|...::||:||:||.|:|||||||||||||:||||.|:|.|||
  Fly   329 EVKDECNTKYGEVNSVIIHESFGTVPEDAVKIFVEFRRIESAIKAVVDLNGRFFGGRQVRAGFYN 393

  Rat   393 LDKFRVLDL 401
            .|||:...|
  Fly   394 YDKFKCFQL 402

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbm17	NP_001013076.1	G-patch	235..279	CDD:396249	31/78 (40%)
		RRM_UHM_SPF45	307..401	CDD:410051	60/94 (64%)
Spf45	NP_001036426.1	G-patch	209..248	CDD:279867	28/77 (36%)
		RRM_UHM_SPF45	307..402	CDD:241091	60/94 (64%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166341471
Domainoid	1	1.000	74	1.000	Domainoid score	I8962
eggNOG	1	0.900	-	-		E1_KOG1996
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H13162
Inparanoid	1	1.050	225	1.000	Inparanoid score	I3415
OMA	1	1.010	-	-		QHG60100
OrthoDB	1	1.010	-	-		D1101846at2759
OrthoFinder	1	1.000	-	-		FOG0005833
OrthoInspector	1	1.000	-	-		oto96754
orthoMCL	1	0.900	-	-		OOG6_103640
Panther	1	1.100	-	-	LDO	PTHR13288
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X4816
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	16	15.770