DRSC/TRiP Functional Genomics Resources

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Protein Alignment DROSHA and RNT1

DIOPT Version :10

Sequence 1:NP_037367.3 Gene:DROSHA / 29102 HGNCID:17904 Length:1374 Species:Homo sapiens
Sequence 2:NP_013966.1 Gene:RNT1 / 855280 SGDID:S000004852 Length:471 Species:Saccharomyces cerevisiae


Alignment Length:309 Identity:77/309 - (24%)
Similarity:132/309 - (42%) Gaps:52/309 - (16%)


- Green bases have known domain annotations that are detailed below.


Human  1090 EPNTDRQLIETSPVLQKLTEFEEAIGVIFTHVRLLARAFTLRT-------VGFNHLTLGHNQRME 1147
            :|.....:::.:....||.|.::        :.:.||.|..::       :..:.:...||:|:|
Yeast   185 DPTKAGDIVKATKWPPKLPEIQD--------LAIRARVFIHKSTIKDKVYLSGSEMINAHNERLE 241

Human  1148 FLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYAITN----DKTKR 1208
            ||||||:..|.|..::..|||:.||.|:.||.:||:|....:.:......|...||    |:...
Yeast   242 FLGDSILNSVMTLIIYNKFPDYSEGQLSTLRMNLVSNEQIKQWSIMYNFHEKLKTNFDLKDENSN 306

Human  1209 PVALRTKTLADLLESFIAALYID---KDLEYVHTFMNVCFFPRLKEFILNQ---------DWNDP 1261
            ....:.|..||:.|::|..|..|   .:|..:..::.....|.::|...||         |.| .
Yeast   307 FQNGKLKLYADVFEAYIGGLMEDDPRNNLPKIRKWLRKLAKPVIEEATRNQVALEKTDKLDMN-A 370

Human  1262 KSQLQQCC--LTLRTEGKEPDIPLYKTLQ---TVGPSHARTYTVAVYFKGERIGCGKGPSIQQAE 1321
            |.||....  .:||..        |.|::   .|.|:......|.   .|..:|.|.|.:|:.|.
Yeast   371 KRQLYSLIGYASLRLH--------YVTVKKPTAVDPNSIVECRVG---DGTVLGTGVGRNIKIAG 424

Human  1322 MGAAMDAL-EKYNFPQMAHQKRFIERKYRQELKEMRWEREHQEREPDET 1369
            :.||.:|| :|......|.|:..|.|. ...||:.  .:::::|:..:|
Yeast   425 IRAAENALRDKKMLDFYAKQRAAIPRS-ESVLKDP--SQKNKKRKFSDT 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DROSHANP_037367.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..95
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 130..406
SF-CC1 220..>278 CDD:273721
Necessary for interaction with DGCR8 and pri-miRNA processing activity. /evidence=ECO:0000269|PubMed:26027739, ECO:0000269|PubMed:26748718 390..1365 75/303 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 452..497
RIBOc 959..1079 CDD:238333
Rnc 1105..1333 CDD:440336 68/256 (27%)
RNT1NP_013966.1 RNase_3_N 44..147 CDD:436545
RIBOc 207..354 CDD:238333 40/154 (26%)
DSRM_RNT1p-like 367..436 CDD:380705 22/80 (28%)
Blue background indicates that the domain is not in the aligned region.

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