DRSC/TRiP Functional Genomics Resources

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Protein Alignment TMEM208 and SND2

DIOPT Version :10

Sequence 1:NP_054906.2 Gene:TMEM208 / 29100 HGNCID:25015 Length:173 Species:Homo sapiens
Sequence 2:NP_013166.1 Gene:SND2 / 850754 SGDID:S000004055 Length:181 Species:Saccharomyces cerevisiae


Alignment Length:178 Identity:39/178 - (21%)
Similarity:71/178 - (39%) Gaps:28/178 - (15%)


- Green bases have known domain annotations that are detailed below.


Human     8 GTRGKKQIFEENRETLKFYLRIILGANAIYCLVTLVFFYSSASFWAWLAL-GFSLAVYGASYHSM 71
            |..|:||.....:.....|.::.|   .:...:..:|.....:...|:.| ..::.::.|.|..:
Yeast     3 GKAGRKQASSNAKIIQGLYKQVSL---FLGMAIVRLFISRKVTIGQWIKLVALNVPMFVALYIIV 64

Human    72 SSMARAAFSEDG-ALMDGGMDLNMEQGMAEHLKDVILLTAIVQVLSCFSLYVWSFW---LLAPGR 132
            .| .:..:  || .::..|:|||....:..:..|:|.|:....: ...:...:.||   ||.|..
Yeast    65 LS-GKPKY--DGNRVVKQGIDLNDNTNLISYFFDLIYLSLFGNI-GIIAFRTFKFWWCLLLCPIY 125

Human   133 ALYLLW--VNVLGPWF----------TADSGTPAPEHNEKRQRRQERR 168
            |.|.|:  .|:..|..          .|:.|    :...|||.::|||
Yeast   126 AGYKLYGLKNMFMPGAQQTQADNRSKNANEG----QSKSKRQMKRERR 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TMEM208NP_054906.2 TMEM208_SND2 8..156 CDD:428546 33/164 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 152..173 6/17 (35%)
SND2NP_013166.1 TMEM208_SND2 1..171 CDD:428546 39/178 (22%)

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