DRSC/TRiP Functional Genomics Resources

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Protein Alignment TMEM208 and snd2

DIOPT Version :10

Sequence 1:NP_054906.2 Gene:TMEM208 / 29100 HGNCID:25015 Length:173 Species:Homo sapiens
Sequence 2:NP_593272.1 Gene:snd2 / 2543218 PomBaseID:SPAC56E4.05 Length:192 Species:Schizosaccharomyces pombe


Alignment Length:163 Identity:35/163 - (21%)
Similarity:78/163 - (47%) Gaps:7/163 - (4%)


- Green bases have known domain annotations that are detailed below.


Human    12 KKQIFEENRETLKFYLRIILGANAIYCLVTLVFFYSSASFWAWLALGFSLAVYGASYHSMSSMAR 76
            :|::..:|:..|.|.|...|..|.::.::.. |..|..|.::.....|:....|..::.:...|.
pombe     6 QKKLAAQNKHILTFMLAADLIVNVLFWILRF-FVRSGLSKFSKFVYAFASISSGFLHYQLHRAAA 69

Human    77 AAFSEDGALMDGGMDLNMEQGMAEHLKDVILLTAIVQVLSCF-SLYVWSFWLLAPGRALY----L 136
            ..:...|:|:..|.|| :::|:..::.|.:..:.|:..|:.. |:.|::|:||.|...:|    |
pombe    70 PKYDARGSLLYVGQDL-LQEGVTSYMVDYMYFSWILIFLAALTSVKVFAFYLLVPIFVVYKAAPL 133

Human   137 LWVNVLGPWFTADSGTPAPEHNEKRQRRQERRQ 169
            |.:.:.......:.....|...:::|::|:.:|
pombe   134 LKMLLQQLKNFKNQALNQPPQQQQQQQQQQHQQ 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TMEM208NP_054906.2 TMEM208_SND2 8..156 CDD:428546 31/148 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 152..173 4/18 (22%)
snd2NP_593272.1 TMEM208_SND2 1..187 CDD:428546 35/163 (21%)

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