DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SETD2 and SET2

DIOPT Version :10

Sequence 1:NP_054878.5 Gene:SETD2 / 29072 HGNCID:18420 Length:2564 Species:Homo sapiens
Sequence 2:NP_012367.2 Gene:SET2 / 853271 SGDID:S000003704 Length:733 Species:Saccharomyces cerevisiae


Alignment Length:816 Identity:209/816 - (25%)
Similarity:352/816 - (43%) Gaps:226/816 - (27%)


- Green bases have known domain annotations that are detailed below.


Human  1413 SDSESDGELQDRKKVRVEVEQGETSVPPGSALVGPSCVMDDFRDPQRWKECAKQGKMPCYFDLIE 1477
            |.::|....:|.|::.....:|..          |..:.|  ::|...:|...:      |:.::
Yeast     2 SKNQSVSASEDEKEILNNNAEGHK----------PQRLFD--QEPDLTEEALTK------FENLD 48

Human  1478 ENVYLTERKKNKSHRDIKRMQCECTPLSKDERAQG-EIACGE--DCLNRLLMIEC----SSRCPN 1535
            :.:|..:|.....:.|.  |:|:|    .:|.:.| ..||.|  ||:|||.:|||    .|.|  
Yeast    49 DCIYANKRIGTFKNNDF--MECDC----YEEFSDGVNHACDEDSDCINRLTLIECVNDLCSSC-- 105

Human  1536 GDYCSNRRFQRKQHADVEVILTEKKGWGLRAAKDLPSNTFVLEYCGEVLDHKEFKARVKEYARNK 1600
            |:.|.|:|||:||:|.:.:..|:.||:|:||.:|:.:|.|:.||.|||::..||:.|:.:|.:..
Yeast   106 GNDCQNQRFQKKQYAPIAIFKTKHKGYGVRAEQDIEANQFIYEYKGEVIEEMEFRDRLIDYDQRH 170

Human  1601 NIHYYFMALKNDEIIDATQKGNCSRFMNHSCEPNCETQKWTVNGQLRVGFFTTKLVPSGSELTFD 1665
            ..|:|||.|:|.|.||||.||:.:||.||||.||....||.|..:||:|.|..:.:..|.|:|||
Yeast   171 FKHFYFMMLQNGEFIDATIKGSLARFCNHSCSPNAYVNKWVVKDKLRMGIFAQRKILKGEEITFD 235

Human  1666 YQFQRYGKEAQKCFCGSANCRGYLGGENR------------------VSIRAAGGKMKK------ 1706
            |...|||.:||||:|...||.|:|||:.:                  ||:.....|:||      
Yeast   236 YNVDRYGAQAQKCYCEEPNCIGFLGGKTQTDAASLLPQNIADALGVTVSMEKKWLKLKKLSGEPI 300

Human  1707 ------------ERSRKKDSVDGELEALMENGEGLSDKNQVLSLSRLMVRIETLEQKLTCLELIQ 1759
                        .:|.:...:|..::........|...|:::: |:|:.|:.|::......:.|:
Yeast   301 IKNENENINIEFLQSLEVQPIDSPVDVTKIMSVLLQQDNKIIA-SKLLKRLFTIDDDSLRHQAIK 364

Human  1760 NTHSQSCLKSFLERHGLSLLWIWMAELGDGR-----ESNQKLQEEIIKTLEHLPIPTKNMLEES- 1818
             .|..:|....|:      |:|......||:     |.:.|..:.|:..|..||..|:|.:|.| 
Yeast   365 -LHGYTCFSKMLK------LFITEQPQVDGKGNETEEDDIKFIKGILDFLLELPKTTRNGIESSQ 422

Human  1819 -----KVLP------------IIQRWSQTKT----------------------AVPP---LSEGD 1841
                 |.||            ::::||:.:|                      .:||   :...:
Yeast   423 IDNVVKTLPAKFPFLKPNCDELLEKWSKFETYKRITKKDINVAASKMIDLRRVRLPPGWEIIHEN 487

Human  1842 G----YSSENTSRAHTPLNTPDPSTKL-STEADTD-----------TPKKLMFRRLKIISENSMD 1890
            |    |::|..::.|.|   |..|:|: |:.::|.           ||..|..::.|:..|    
Yeast   488 GRPLYYNAEQKTKLHYP---PSGSSKVFSSRSNTQVNSPSSSGIPKTPGALDSKKHKLSDE---- 545

Human  1891 SAISDATSELEGKDGKEDLDQLENVPVE--EEEELQSQQLLPQQLPECKVDSETNIEASKLPTSE 1953
                    |.|.|  |:...:.|.:.:|  ::|||:|   |.|:|   |:::|..          
Yeast   546 --------EYERK--KQKRLEYERIALERAKQEELES---LKQKL---KLENERK---------- 584

Human  1954 PEADAEIEPKESNGTKLEEPINEETPSQD--EEEGVSDVESERSQEQPDKTVDISDLATKLLDSW 2016
                          :.||:.|.|....::  :||....||::.::....|||..|.   :|..:|
Yeast   585 --------------SVLEDIIAEANKQKELQKEEAKKLVEAKEAKRLKRKTVSQSQ---RLEHNW 632

Human  2017 KDL------KEVYRIPKKSQTEKENTTTERGRDAVGF-------RDQTPAPKTPNRSRERDPDKQ 2068
            ...      ..:.:.|:..|.:.|| ..:..:|.|..       :|.:.||.......:|...|:
Yeast   633 NKFFASFVPNLIKKNPQSKQFDHEN-IKQCAKDIVKILTTKELKKDSSRAPPDDLTKGKRHKVKE 696

Human  2069 TQN--------KEKRKRRSSLS---------PPSSA 2087
            ..|        |:|:|:..:||         |||::
Yeast   697 FINSYMDKIILKKKQKKALALSSASTRMSSPPPSTS 732

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SETD2NP_054878.5 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..30
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 180..211
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 272..561
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 607..626
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 964..995
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1036..1101
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1133..1233
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1264..1352
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1393..1443 5/29 (17%)
Interaction with TUBA1A. /evidence=ECO:0000269|PubMed:27518565 1418..1714 110/338 (33%)
AWS 1495..1549 CDD:197795 25/60 (42%)
SET_SETD2 1549..1690 CDD:380949 64/140 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1831..1872 13/81 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1921..2142 43/199 (22%)
Low charge region. /evidence=ECO:0000269|PubMed:16118227 2137..2366
WW 2391..2420 CDD:459800
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2439..2465
Interaction with POLR2A. /evidence=ECO:0000269|PubMed:16314571 2457..2564
SRI 2467..2555 CDD:462404
SET2NP_012367.2 AWS 64..119 CDD:197795 26/62 (42%)
SET_SETD2 119..260 CDD:380949 64/140 (46%)
WW_1 479..505 CDD:375933 6/28 (21%)
TolA 545..>626 CDD:442298 27/124 (22%)
SRI 627..703 CDD:462404 14/76 (18%)
Blue background indicates that the domain is not in the aligned region.

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