DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SETD2 and setd2

DIOPT Version :10

Sequence 1:NP_054878.5 Gene:SETD2 / 29072 HGNCID:18420 Length:2564 Species:Homo sapiens
Sequence 2:XP_009290459.2 Gene:setd2 / 794199 ZFINID:ZDB-GENE-030131-2140 Length:2737 Species:Danio rerio


Alignment Length:3063 Identity:1187/3063 - (38%)
Similarity:1543/3063 - (50%) Gaps:853/3063 - (27%)


- Green bases have known domain annotations that are detailed below.


Human    23 PEEEEN----EAKIENVQKTGFIKGPMFKGVASSRFLPKGTKTKVNLEEQGRQKVSFSFSLTKKT 83
            ||..|:    ..|:||..|....||...:.|.::..|.||.|||||||||||||||||.:.|||.
Zfish     7 PELREDVKDCSIKVENFPKQVIFKGLAPRVVLTNHLLMKGNKTKVNLEEQGRQKVSFSLTQTKKP 71

Human    84 LQNRFLTALGNEK----QSDTPNPPAVPLQVD------------STPKMKMEIGDTLSTAEESSP 132
            .||.||.....||    .|.|.....||:.|.            :||    .:|:|.:....|..
Zfish    72 RQNVFLPPPSPEKSASEHSSTSQAGPVPVSVQAGQTYETKNVDTNTP----AVGETQTAPTVSFS 132

Human   133 PKSRVELGKIHFKKHLLHVTSRPLLATTTAVASPPTHAAPLPAVIAESTTVDSPPSSPPPPPPPA 197
            .:||..|||:||||.:|..|                       |:.:.:||.             
Zfish   133 LRSRHVLGKMHFKKQILSST-----------------------VVGDKSTVS------------- 161

Human   198 QATTLSSPAPVTEPVALPHTPITVLMAAPVPLPVDVAVRSLKEPPIIIVPESLEADTKQDTISNS 262
                 ::.|.::|||                :|.|....|.|    :....||:...|...:..|
Zfish   162 -----TASAEISEPV----------------VPSDKITSSAK----VETENSLQQSHKNSVVDGS 201

Human   263 LEEHVTQILNEQADISS---KKEDSHIGKDEEIPDSSKISLSCKKTGSKKKSSQSEGIFLGSESD 324
             .|.|::..|.|..|:|   ..:.|||||::  .|||.||   :...|:|....|:....|.|:|
Zfish   202 -SEKVSKEENPQEKIASCLKGPDSSHIGKED--TDSSIIS---EHEESRKSKQCSDSKLAGLETD 260

Human   325 EDSVRTSSSQRSHDLKFSASIEKERDFKKSSAPLKSEDLGKPSRSKTDRDD--KYFSYSKLERDT 387
            ..|.||||||:|:|.:.....|...:..|.|:..|:|    ..:|:|||.|  |...:||.:||:
Zfish   261 GQSTRTSSSQKSNDRRNKTKSESHSNEVKRSSNSKTE----LDKSRTDRKDEEKGIRHSKSDRDS 321

Human   388 RYVSSR-CRSERERRRSRSHSRS-ERGSRTNLSYSRSE-----------RSHYYDSDRRYHRSSP 439
            |::||| .||:|:|||::|.||| .|||||: ||||||           ||||::|:||:|||||
Zfish   322 RHMSSRSSRSDRDRRRTKSRSRSRSRGSRTS-SYSRSERSRSERQSRTDRSHYHESERRFHRSSP 385

Human   440 YRERTRYSRPYTDNRARESSDSEEEYKKTYSR-----RTSSHSSSYRDLRTSSYSKSDRDCK-TE 498
            :||| |.||..||.|:|:|||||:::::|.:|     |:|::|||.:|.::|::|:|.||.| |:
Zfish   386 HRER-RSSRSRTDGRSRDSSDSEDDHRRTRTRGSDSSRSSTYSSSQKDSKSSTHSRSHRDSKPTD 449

Human   499 TS-YLEMERRGKYSSKLERESKRTSENEAIKRCCSPPNELGFRRGSSYSKHDSSASRYKSTLSKP 562
            .| ..|.::|.:: ||.|...:.:||.:|:                    |..|::|.|      
Zfish   450 CSRSSESDKRAQH-SKSESNRRSSSEIDAV--------------------HKKSSARTK------ 487

Human   563 IPKSDKFKNSFCCTELNEEIKQSHSFSLQTPCSKGSELRMINKNPEREKAGSP-APSNRLNDSPT 626
            :..:||..||...|......|:.|    :|......|.|.     :|:..||. :|.:..:.|. 
Zfish   488 LEVNDKISNSNLTTSSRTSEKKIH----KTSSDSDEEHRR-----KRQSQGSDRSPRSGTSSSR- 542

Human   627 LKKLDELPIFKSEFITHDSHD--SIKELDSLSKVKNDQLRSFCPIELNINGSPGAESDLATFCTS 689
                      |::.:.|:|.:  :..|..|..:             ||.|    |:.....|.|.
Zfish   543 ----------KNDLVDHNSFNIGTGTERQSTDR-------------LNTN----AKDSQLVFVTV 580

Human   690 KTDAVLMTSDDSVTGSELSPLVKACMLSSNGFQNISRCKEKDLDDTCMLHKKSESPFRETEPLVS 754
            .:.......||..|..:          |.|..|.:.....|  .:.|..:||:|.         .
Zfish   581 TSQKESSNIDDQCTPPK----------SKNSSQQMHEATHK--VNLCETNKKAEH---------Q 624

Human   755 PHQDKLMSMPVMT-VDYSKTVVKEPVDTRVSCCKTKDSDIYCTLNDSNPSLCNSEAENIEPSVMK 818
            |....|.|:...| |..||... |.:...:|....|       |...:|:      |..||. ||
Zfish   625 PSNQDLSSLEKCTNVPESKKTT-ERLTESISITSGK-------LEVRSPT------EVDEPG-MK 674

Human   819 ISSNSFMNVHLESKPVICDSRNLTDHSKFACEEYKQSIGSTSSASVNHFDDLYQPIGSSGIASSL 883
            ::      |.::|:.:                    ::|.|.|..|......: .:||...:.|:
Zfish   675 VT------VPIQSEVL--------------------TVGQTESICVGPAPSEH-TMGSLTDSLSV 712

Human   884 QSLPP------GIKVDSLTLLKCGENTSPVLDAVLKSKKSSEFLKHAGKETIVEVGS-DLPDSG- 940
            :.|||      ..|.|..:|: ..:.::||...|...:|.||          ..:|| :.|::| 
Zfish   713 KELPPEGSLILNTKSDESSLI-ISQISTPVTLTVQPCEKDSE----------QNIGSPEQPNTGI 766

Human   941 --KGFASRENRRNNGLSGKCLQEAQEEGNSILPE---------------------RRGRPEISLD 982
              |..:::::|.:  :.|:...|.|.....:.|:                     ::..||:..:
Zfish   767 SKKDASAKKSRWD--IVGQVTSEYQSPAKLVNPDVKKVMLAQKIEFSDTTPDNCSQKLDPEVPSE 829

Human   983 ERGEGGHVHTSD----DSEVVFSSCDLNL-TMEDSDGVTYALKCDSSGHA--------------- 1027
            :..|   ||..|    :|....||...|. |....|.:...::...|..|               
Zfish   830 KSVE---VHARDTTAAESHQEISSFTSNFGTKGTHDELQKTVEIPQSTSALVVSDFQPSKEKVNV 891

Human  1028 ----PEIVSTVHEDYSGSSESSNDESDSEDTDSDDSSIPRNRLQSVVVVPKNSTLPME-----ET 1083
                |||......::.|...|.:.||:..|:||||..:...||.||||||||||:.:|     |.
Zfish   892 DKTKPEIQDPDSLNHDGKCHSDDSESEESDSDSDDGRVSLKRLHSVVVVPKNSTIALETNDKAEP 956

Human  1084 SPCSSRSS---QSYRH--------YSDHWEDERLESRRHLYEEKFESIASKACPQTDKFFLHKGT 1137
            :|.||..|   |:..|        |..:.:....||...||    :..|..||...:.    || 
Zfish   957 APASSLFSGNQQTDTHESINKEFPYGFNNQSTLKESSAALY----KGSAQAACQSPNV----KG- 1012

Human  1138 EKNPEISFTQSSRKQIDNRLPELSHPQSDGVDSTSHTDVKSDPLGH--PNSEETVKAKIPSRQQE 1200
                 :|: ||               ||:.||||||.:|.|   .|  .|.....:..|..:..:
Zfish  1013 -----VSY-QS---------------QSNMVDSTSHLEVMS---AHVDKNWSAQERPNISGQINQ 1053

Human  1201 ELPIYSSDFE---DVPNKSWQQTTFQNRPDSRLGKTELSFSSSCEIPHVDGLHSSEELRNLGWDF 1262
            |   |..:||   :.|.....|  :..||||..|:              .|..|.....:|.|||
Zfish  1054 E---YVQNFEKTCEKPETDHHQ--YHGRPDSWNGR--------------KGDFSVGRGDSLVWDF 1099

Human  1263 SQ-EKPSTTYQQPDSSYGACGGHKYQQNAEQYGGTRDYWQGNGYWDP---RSGRPPGTGV---VY 1320
            :| |:||:|:|||||||..      .|.........|.|.     .|   ::.|...|.|   .:
Zfish  1100 NQSEQPSSTFQQPDSSYST------PQPLFDSVHREDPWA-----QPAISKTSRTVNTHVPFQYH 1153

Human  1321 DRTQGQVPDSLTDDREEEENWDQQDGSHFS-DQSDKFLLSLQKDKGSVQAPEISSNSIKDTLAVN 1384
            |......|||||:|.:     |.::|.... .|:......|......|||||||||....|    
Zfish  1154 DLVHQIHPDSLTNDHD-----DDREGRILGIKQASLLSAGLPGPSPFVQAPEISSNCSFTT---- 1209

Human  1385 EKKDFSKNLEKNDIK---DRGPLKKRRQEIESDSESDGE---------------LQDRKKVRVEV 1431
            |.::.|:....::.|   .|||.||||||.||:|:::.|               |:|.|:...::
Zfish  1210 ESQNISEAPRDDNQKPHRGRGPPKKRRQEFESESDNEAEAGLSKRECFDESSRPLKDAKESFHQI 1274

Human  1432 EQGETSVPPGSALVGPSCVMDDFRDPQRWKECAKQGKMPCYFDLIEENVYLTERKKNKSHRDIKR 1496
            ::.:.          |...:.:|.||..|::.|||.|||.||||||||:||||||||||||||||
Zfish  1275 QEVQR----------PLLSLKEFSDPFVWRDKAKQKKMPPYFDLIEENLYLTERKKNKSHRDIKR 1329

Human  1497 MQCECTPLSKDERAQGEIACGEDCLNRLLMIECSSRCPNGDYCSNRRFQRKQHADVEVILTEKKG 1561
            |||||..|||:|||:|.:|||||||||||||||||||.||.||||||||.|||||.||||||.||
Zfish  1330 MQCECAILSKEERARGILACGEDCLNRLLMIECSSRCLNGAYCSNRRFQMKQHADYEVILTESKG 1394

Human  1562 WGLRAAKDLPSNTFVLEYCGEVLDHKEFKARVKEYARNKNIHYYFMALKNDEIIDATQKGNCSRF 1626
            |||||||||..||||||||||||||:||||||||||||||||||||||||:||||||.|||||||
Zfish  1395 WGLRAAKDLQPNTFVLEYCGEVLDHREFKARVKEYARNKNIHYYFMALKNNEIIDATLKGNCSRF 1459

Human  1627 MNHSCEPNCETQKWTVNGQLRVGFFTTKLVPSGSELTFDYQFQRYGKEAQKCFCGSANCRGYLGG 1691
            |||||||||||||||||||||:||||||.|.:|:|||||||||||||||||||||:.:|||.:||
Zfish  1460 MNHSCEPNCETQKWTVNGQLRIGFFTTKAVTAGTELTFDYQFQRYGKEAQKCFCGAPSCRGLIGG 1524

Human  1692 ENRVSIRAAGGKMKKERSRKKD------SVDGELEALMENGEGLSDKNQVLSLSRLMVRIETLEQ 1750
            |.|||:||||||.::|||||||      ::|.|||||.||||||..:.:|:||.|||||:||:||
Zfish  1525 ETRVSVRAAGGKKQRERSRKKDTDSALTTLDEELEALQENGEGLCGEKEVISLCRLMVRVETMEQ 1589

Human  1751 KLTCLELIQNTHSQSCLKSFLERHGLSLLWIWMAELGDGRE---SNQKLQEEIIKTLEHLPIPTK 1812
            :||||:|||||.:..|||.||:.||||||||:|.||.:.:.   :|.|||.||:|.|..|||.||
Zfish  1590 RLTCLKLIQNTQNPLCLKQFLDHHGLSLLWIFMVELSEAKTNSVNNIKLQLEIMKALSVLPISTK 1654

Human  1813 NMLEESKVLPIIQRWSQTKTAVPPLSEGDGYSSENTSRAHTPLNTPD-PSTKLSTEADTDTPKKL 1876
            ||||||:||..||||:|:::...| :|.||||||:||||.||||||| |..||:||.|.||||:.
Zfish  1655 NMLEESRVLQFIQRWAQSRSLSQP-AEQDGYSSESTSRAQTPLNTPDGPPAKLATELDGDTPKRA 1718

Human  1877 MFRRLKIISENSMDSAISDATSELEGKDGK-EDLDQLENVP-----------------------V 1917
            ::||||||||||:|||:|||:...:||:.: |:.:::|:.|                       .
Zfish  1719 VYRRLKIISENSLDSALSDASKASDGKEEEDEEEEEMEDEPSKLESTTERKIKVESTEAPPVSQA 1783

Human  1918 EEEEELQSQ--------QLLPQ-----------QLPECKV------------------------- 1938
            |.|.||:.:        :|:|:           |.||.|:                         
Zfish  1784 ELEVELKQEAPETVEIPRLMPEAVGSEGETLETQEPEEKLLCTPEGQLKDEKTVEETKSDEPSEN 1848

Human  1939 ----------------------------DSETNI-------EASKLPTSEPEAD---AEI----- 1960
                                        |:||.:       .:|:..|||.:|.   |||     
Zfish  1849 QTESAAVKEDPLVTDTTSAADISNDVVADAETPVTETQVENASSEQSTSEEDASCSTAEITSAQP 1913

Human  1961 -------------------EPKE----------------SNGTKLEE------------------ 1972
                               .|||                |||....|                  
Zfish  1914 AEVIIEGISSDSAAIVIKSTPKESPSVSVKTPPTGSDVVSNGNAPSEAVFAPSEAVAAPLEAAVA 1978

Human  1973 ----------------------------------------------------------------- 1972
                                                                             
Zfish  1979 PSEAVASFPEAVASLPETVAAPAEAVDEPAEAVADPAEAVADPAEAVADPAEAVAEPAEAVAAPA 2043

Human  1973 -------------------------------PINEE-----TPSQDEEEGVSDVESERSQEQPDK 2001
                                           |:..|     ||||||||||||||||||||...:
Zfish  2044 EAVAAPPEAVAAPPEAVAAPVSADVSALAIVPVPAEGAAVGTPSQDEEEGVSDVESERSQEPQIR 2108

Human  2002 TVDISDLATKLLDSWKDLKEVYRIPKKSQTEKENTTTERGRDAVGFRDQTPAPKTPNRSRERDPD 2066
            ..||||:|.:|||||||||||||||||||.|||:....|.|:::    .||...:.:|.|||:.|
Zfish  2109 ASDISDMAARLLDSWKDLKEVYRIPKKSQVEKESNDRSRDRESL----MTPRTSSSSRERERERD 2169

Human  2067 KQ-----------------------------TQNKEKRKRRSSLSP-PSSAYERGTKRPDDRYD- 2100
            |:                             .::.::::||.|.|| |..|||| ::|.||||: 
Zfish  2170 KERDRDRDRDWEREREWDRDRERDRDGERPTLRSADRKRRRGSTSPLPPPAYER-SRRNDDRYEQ 2233

Human  2101 TPTSKKKVRIKD-RNKLSTEERRKLFEQEVAQREAQK---------------------------- 2136
            :.:||||:..|: |.||||||||||||||||||||||                            
Zfish  2234 SSSSKKKLHTKEARTKLSTEERRKLFEQEVAQREAQKQQQQQLQQQQQQQQQQQQQQQQQQQQQQ 2298

Human  2137 ---------------QQQQMQNLGMTSPLPYDSLGYNAPHHPFAGYPPGYPMQAYVDPSNPNAGK 2186
                           ||||:|.|.. :||.|.|    :|:  |..||||||:|.||||:||||||
Zfish  2299 QQQQQQQQQQQQQQQQQQQLQTLAF-NPLAYTS----SPN--FMNYPPGYPIQTYVDPTNPNAGK 2356

Human  2187 VLLPTPSMDPVC-SPAPYDHAQPL-----VGHSTEPLSAPPPVPVVPHVAAPVEVSS---SQYVA 2242
            ||||||.::|:| :||.....||.     :...:...:...|...:.|:.||:|:||   :|:| 
Zfish  2357 VLLPTPPVEPICVTPAAGTFEQPPALDLGIASPSSTTTQAGPASSLAHIPAPLELSSGTQTQFV- 2420

Human  2243 QSDGVVHQDSSVAVLPVPAPG-----PVQGQNYSVWDSN-QQSVSVQ----QQYS-PAQSQATIY 2296
             ...|..||.|||||.|||..     |.|....::||.| ||:|:||    |||| .:|.||.||
Zfish  2421 -QPAVPAQDPSVAVLSVPAQAASPQIPSQQGYTTLWDPNTQQAVTVQTQPTQQYSTTSQPQAAIY 2484

Human  2297 YQGQTCPTVYGVTSPYSQTTPPIVQSYAQPSLQYIQGQQIFTAHPQGVVVQPAAAVTTIVAPGQP 2361
            ||||.|.|:|.:.:.|.||.||::|:|.:|:..|:..||::|   ||      ..|||||.   .
Zfish  2485 YQGQPCQTIYSIPAGYPQTNPPVIQAYTEPAANYLHSQQVYT---QG------GTVTTIVT---S 2537

Human  2362 QPLQPSEMVVTNNLLDLPPPSPPKPKTIVLPPNWKTARDPEGKIYYYHVITRQTQWDPPTWESPG 2426
            ||:| .||:|.||::|||||||||||||:|||:||.||||||:|||||:||||||||||:|:...
Zfish  2538 QPVQ-QEMIVPNNIIDLPPPSPPKPKTIILPPSWKVARDPEGRIYYYHIITRQTQWDPPSWDGTT 2601

Human  2427 DDASLEHEAEMDLGTPTYDENPMKASKKPKTAEADTSSELAKKSKEVFRKEMSQFIVQCLNPYRK 2491
            ::||:|||||||||||||||||.|.|  .||||||||||||||||||||||||||||||||||||
Zfish  2602 EEASVEHEAEMDLGTPTYDENPSKFS--TKTAEADTSSELAKKSKEVFRKEMSQFIVQCLNPYRK 2664

Human  2492 PDCKVGRITTTEDFKHLARKLTHGVMNKELKYCKNPEDLECNENVKHKTKEYIKKYMQKFGAVYK 2556
            ||||:|||:.|||||||||||||||||||||.|||||||||||||||||||||||||||||:||:
Zfish  2665 PDCKLGRISNTEDFKHLARKLTHGVMNKELKSCKNPEDLECNENVKHKTKEYIKKYMQKFGSVYR 2729

Human  2557 PKEDTELE 2564
            |||||||:
Zfish  2730 PKEDTELD 2737

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SETD2NP_054878.5 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..30 3/10 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 180..211 3/30 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 272..561 124/313 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 607..626 5/19 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 964..995 7/55 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1036..1101 30/80 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1133..1233 29/104 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1264..1352 28/95 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1393..1443 17/67 (25%)
Interaction with TUBA1A. /evidence=ECO:0000269|PubMed:27518565 1418..1714 225/316 (71%)
AWS 1495..1549 CDD:197795 44/53 (83%)
SET_SETD2 1549..1690 CDD:380949 124/140 (89%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1831..1872 25/41 (61%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1921..2142 132/536 (25%)
Low charge region. /evidence=ECO:0000269|PubMed:16118227 2137..2366 108/248 (44%)
WW 2391..2420 CDD:459800 24/28 (86%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2439..2465 20/25 (80%)
Interaction with POLR2A. /evidence=ECO:0000269|PubMed:16314571 2457..2564 100/106 (94%)
SRI 2467..2555 CDD:462404 82/87 (94%)
setd2XP_009290459.2 None

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