DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SETD2 and setd2

DIOPT Version :10

Sequence 1:NP_054878.5 Gene:SETD2 / 29072 HGNCID:18420 Length:2564 Species:Homo sapiens
Sequence 2:XP_012820433.2 Gene:setd2 / 100492810 XenbaseID:XB-GENE-995488 Length:2997 Species:Xenopus tropicalis


Alignment Length:3153 Identity:1414/3153 - (44%)
Similarity:1773/3153 - (56%) Gaps:756/3153 - (23%)


- Green bases have known domain annotations that are detailed below.


Human    12 MGDFYDPEHPT----------------PE------------EEENEAKIE-NVQKTGFIKGPMFK 47
            ||||||||:||                ||            ||:||||.: ::.|..|.|...||
 Frog     1 MGDFYDPEYPTESGIDEISAQEEKQSNPEAISLAELPACQQEEDNEAKNDASLAKGTFGKANPFK 65

Human    48 GVASSRFLPKGTKTKVNLEEQGRQKVSFSFSLTKKTLQNRFLTALGNEKQSDTPNP-PAVPLQVD 111
            |:.||||||||||.||||||||||||||||||||||.|||.|.:|||:||:::.:| ||     :
 Frog    66 GLPSSRFLPKGTKAKVNLEEQGRQKVSFSFSLTKKTFQNRLLNSLGNDKQNESQSPSPA-----E 125

Human   112 STPKMKMEIGDTLSTAEESSPPKSRVELGKIHFKKHLLHVTSRPLLATTTAVASPPTHAAPLPAV 176
            ...|:|:::.|.....||.:..|.:|||||||||||||.||::                  ||| 
 Frog   126 HISKLKLDLNDFTGETEEQTLSKPKVELGKIHFKKHLLSVTNK------------------LPA- 171

Human   177 IAESTTVDSPPSSPPPPPPPAQATTLSSPAPVTE--PVALPHTPITVLMAAPVPLPVDVAVRSLK 239
                       ..||||||||.....:||...|:  ||..|.:|    .....|..:.:.::|..
 Frog   172 -----------QPPPPPPPPASLPAPTSPVASTQATPVKQPSSP----EHEEAPAIITLGLQSTN 221

Human   240 EPPIIIVP------------------------ESLEADTKQDTISNSLEEHVTQILNEQADISSK 280
            |.|..:||                        :|...|.|::::.::||....|.::|:||:|..
 Frog   222 EIPPSVVPSQAILTKEVVQGTCDAKESSRSLTDSKGLDKKENSVVSNLETPNNQKVSEKADLSLL 286

Human   281 KEDSHIGKDEEIPDSS---KISLSCKKTGSKKKSSQSEGIFLGSESDEDSVRTSSSQRSHDLKFS 342
            ||.|||||||:.|.||   |::.|.:|:.||.|.|.|:|..:|||||||||:||||.:||:||  
 Frog   287 KESSHIGKDEKSPCSSQKPKLNPSPEKSSSKSKFSHSDGAVVGSESDEDSVQTSSSHKSHELK-- 349

Human   343 ASIEKERDFKKSSAPLKSEDLGK--PSRSKTDRDDKYFSYSKLERDTRYVSSRCRSERERRRSR- 404
            |:..||||.|:||..|:|||.||  .||||..:|:||.:|||.:||:||..|..||:|:||||| 
 Frog   350 AATSKERDSKRSSVSLRSEDSGKYSSSRSKCTKDEKYSNYSKSDRDSRYSYSHSRSDRDRRRSRS 414

Human   405 -----SHSRSERGSRTNLSYSRSERSHYYDSDRRYHRSSPYRERTRYSRPYTDNRARESSDSEEE 464
                 |.|||:|||:::.|||||||||||||||||||||||  ||||||.|.|:|||:|||||::
 Frog   415 RSRSHSRSRSDRGSKSSSSYSRSERSHYYDSDRRYHRSSPY--RTRYSRSYADSRARDSSDSEDD 477

Human   465 YKKTYSRR------TSSHSSSYRDLRTSSYSKSDRDCKTETSYLEMERRGKYSSKLERESKRTSE 523
            :::|:||.      :||||||||:.|||||||.|||.|.::|| :::|||:.:|:.||:.:|:||
 Frog   478 HRRTHSRSSDSRRPSSSHSSSYRESRTSSYSKYDRDSKGDSSY-DLDRRGRDTSRHERDFRRSSE 541

Human   524 NEAIK----RCCSPPNELGFRRGSSYSKHDSSAS---------RYKSTLSKP------------- 562
            .|..|    |..||..|...:|..|:||.|:|.:         .:.::::||             
 Frog   542 KEPSKKASPRKASPKKEAEEKREWSHSKADNSGNAGSKSGSKQEHSNSVTKPSKWDMEKKPTQSA 606

Human   563 -------------IPKSDKFKNSFCCTELNEEIKQSHS-----------FSLQTPCSKGSELRMI 603
                         :..|:..|.||...:........||           |:.:..||..:..:|:
 Frog   607 IEKEEHKKGKDEVLSSSNVKKTSFPAHQQTSPPYSKHSDHFTSSSPGPEFTQERDCSSQTAKKML 671

Human   604 NK------------------------------------------NPEREKAGS------------ 614
            :.                                          .||.....|            
 Frog   672 HTTSGSKYDDEDDDKQHKSPFQGIYNLSPSETWDLVTLSTTEDLEPEEHTTSSDNCRSDAYGKDS 736

Human   615 ----PAP---------SNRLN---------DSPTLKKLDEL-----------------PIFKSEF 640
                |:|         :|:::         :||...|::||                 ....|:.
 Frog   737 DDSQPSPHKVTKLHTRTNKISEDLQASKSTESPQKPKINELHPRTHKVSDDWQPRTHKVSDSSQH 801

Human   641 ITHDSHD--SIKELDSLS----KVKND----QLRSFCPIELNI---------------------- 673
            .||...|  |.|..|.|.    ||.:|    ..::...:||.|                      
 Frog   802 RTHKVCDDRSCKTSDDLQPTTYKVSDDLQPRPHKTSDDLELRIHKNEDDPRTLKANEDSWTRTHK 866

Human   674 ---NGSPGA--ESDLATFCTSKTDAVLMT-----SDDSVTGS--------ELSPLVKACMLS--- 717
               |..|.:  ||......|.|..|...|     |:||.:.|        ..|..|.....|   
 Frog   867 VSDNSQPRSHKESHNMQLRTHKASADTQTKTHKVSEDSQSRSYRVSEDSQSRSHKVSEDSQSRSH 931

Human   718 --SNGFQNISRCKEKDL------------------------------------------------ 732
              |...|:.|....:||                                                
 Frog   932 KVSEDSQSRSHKVSEDLQSRSLKLSEDSQPRSYKVSEDSQPRSYKVSEDSQPRSHKVSEDSQPRS 996

Human   733 ------------------------------------------------------------DDTCM 737
                                                                        |....
 Frog   997 HKVSEDSQPRSHKVSEDSQPRSHKVSEDSQPRSHKVSEDSQSRSHKVSEDSQSRSHKVSEDSQSR 1061

Human   738 LHKKSESP-------------------------------------FRETEPLVSPHQDKLMSMPV 765
            .||.||.|                                     |:||:.|  .|:     :|.
 Frog  1062 SHKVSEDPQPKTPKKIDNQRPRTPEIIDDLQPSTPKETDNAQPRTFKETDDL--QHR-----LPY 1119

Human   766 MTVDYSK-----------TVVKEPVDTRVSCCKTKD----------SDIYCTLN---------DS 800
            ...|..:           .:.||..|.:....|..|          :.::...|         ||
 Frog  1120 AAEDMQQRSANASDNTHPKIPKEGEDPKPRTSKVNDGFQPKDHKDGNHLHSETNTIADSVDHDDS 1184

Human   801 NPSLCNSEAENIEPS---VMKISSNSFMNVHL---------------ESKPVI------------ 835
            :|. .:...:..|||   |.||:....:.|.:               .|.||:            
 Frog  1185 HPQ-THILIDGSEPSTNEVFKINKPDTVGVQIPIEEVDLPHDSTEIKASIPVVEHLEKSLEQCEE 1248

Human   836 -------CDSRNL-TDHSKFACEEYKQSIG-----------STSSASV---------NHFDDLYQ 872
                   |.||.| ||.|:...::|.:.:.           .:..|||         |.|:    
 Frog  1249 VEVTLAKCPSRTLETDASEMLIDKYLEHVHKPETCHSVPECQSEMASVRTDPTTEEQNEFE---- 1309

Human   873 PIGSSGIASSLQS---------------LPPGIKVDSLTLLKCGENTSPVLDAVLKSKKSSEFLK 922
             :|..|.|..|::               ||.||.|        .|.|:..:...:...|:   :.
 Frog  1310 -MGQKGTAELLKASINLNQDLPGQVSGHLPEGISV--------AEETAISVAIPISENKN---VV 1362

Human   923 HAGKETIVEVGSDLPDS-GKGFASRENRRNNGLSGKCLQEAQ-EEGNSILP-ERRGRPEISLDER 984
            .:|..|...||:|  || |........:.:..|....|.:.| .|..||.. |...:|..::|| 
 Frog  1363 QSGNTTPFNVGAD--DSQGSSTPDTLGKESPSLDEPALVDIQATERKSIYSFEGIDQPSEAVDE- 1424

Human   985 GEGGHVHTSDDSEVVFSSCDLNLTMEDSDGVTYALKCDSSGHAPEIVSTVHEDYSGS-----SES 1044
                  .|..|.||...| :|:|    .:.||..::.|.:    :.:::.|||:.|:     |:|
 Frog  1425 ------ETKLDKEVETKS-ELHL----ENCVTEEIQRDPT----QTLNSKHEDFIGAINDFYSDS 1474

Human  1045 SNDESDSEDTDSDDSSIPRNRLQSVVVVPKNSTLPMEETSPCSSRSSQSYRHYSDHWEDERLESR 1109
            .:.|||:|||||||||:||||||||||:|:|||:..||.  |  ||....:..||..|.:..||:
 Frog  1475 EDSESDTEDTDSDDSSLPRNRLQSVVVIPQNSTIANEEL--C--RSPYESQTLSDSCETDVAESK 1535

Human  1110 RHLYEEKFESIASKAC-PQTDKFFLHKGTEKNPEISFTQSSRKQIDNRLPELSHPQSDGVDSTS- 1172
            ....|...:.:..|.| |..      |.:::..|....::.::.:.  ||.    :|.||.||| 
 Frog  1536 SVSAEVVQKRVVDKECSPPA------KSSDEVLEDLRAKALKESVS--LPR----RSVGVVSTSQ 1588

Human  1173 ------------HTDVKSDPLGHPNSEETVKAKIPSRQQEELPIYSSDFED----VPNKSWQQTT 1221
                        ||:.|::   |.....|.:..: .::.:::.:|...|:.    .|:.|.::..
 Frog  1589 PEVIARIRSGENHTEYKAE---HETPTSTNRTGL-QKENDKVELYKPSFDQSYQHSPSNSAKKPD 1649

Human  1222 F-----QNRPDSRLGKTELSFSSSCEIPHVDGLHSSEELRNLGWDFSQ-EKPSTTYQQPDSSYGA 1280
            |     .:.|..|.|          :....||..|:|:|..||||||| ||||:||||||||| .
 Frog  1650 FFKERLHHEPPKRAG----------DFSRADGFQSAEDLSGLGWDFSQPEKPSSTYQQPDSSY-M 1703

Human  1281 CGGHKYQQNAEQYGGTRDYWQGNGYWDPRSGRPPGTGVVYDRTQGQVPDSLT---DDREEEENWD 1342
            ...:.|||   .:||...|.:...|||||: ...|..|:|.:..|..|||:|   |:.:|:..||
 Frog  1704 YVDYNYQQ---AFGGAHVYRKDGDYWDPRA-YEKGAQVMYSKPHGPAPDSVTHCYDEDDEDFGWD 1764

Human  1343 QQDGSHFSDQSDKFLLSLQKDKGSVQAPEISSNSIKDTL----AVNEKKDFSKNLEKNDIKDRGP 1403
            ...|..:..||:    ....:..||||.||||||.|..:    |:.|:.  :|..::.|:|:|||
 Frog  1765 TDHGQTYPVQSE----LAYNESSSVQAHEISSNSTKMVVVAPKAIPEQP--AKTSDRLDMKERGP 1823

Human  1404 LKKRRQEIESDSESDGE-LQDRKKVRVEVEQGETSVPPGSALVGPSCVMDDFRDPQRWKECAKQG 1467
            .||||||:|:|.|:|.| |:.:.|:...::|...|.         .|.||||||.|.||:|::||
 Frog  1824 PKKRRQELENDYENDLEALEKKHKMEAALKQDVASY---------LCNMDDFRDSQHWKDCSRQG 1879

Human  1468 KMPCYFDLIEENVYLTERKKNKSHRDIKRMQCECTPLSKDERAQGEIACGEDCLNRLLMIECSSR 1532
            |||.:|||||||||||||||:|||||||||||||..|||:|||||::||||||||||||||||||
 Frog  1880 KMPPFFDLIEENVYLTERKKSKSHRDIKRMQCECPVLSKEERAQGQVACGEDCLNRLLMIECSSR 1944

Human  1533 CPNGDYCSNRRFQRKQHADVEVILTEKKGWGLRAAKDLPSNTFVLEYCGEVLDHKEFKARVKEYA 1597
            ||||||||||.||:||||.||.||||||||||||||||.|||||||||||||||||||:||||||
 Frog  1945 CPNGDYCSNRSFQKKQHAGVEAILTEKKGWGLRAAKDLKSNTFVLEYCGEVLDHKEFKSRVKEYA 2009

Human  1598 RNKNIHYYFMALKNDEIIDATQKGNCSRFMNHSCEPNCETQKWTVNGQLRVGFFTTKLVPSGSEL 1662
            ||||||||||||||||||||||||||||||||||:|||||||||||||:|||||||::||:||||
 Frog  2010 RNKNIHYYFMALKNDEIIDATQKGNCSRFMNHSCDPNCETQKWTVNGQVRVGFFTTRVVPAGSEL 2074

Human  1663 TFDYQFQRYGKEAQKCFCGSANCRGYLGGENRVSIRAAGGKMKKERSRKKDSVDGELEALMENGE 1727
            ||||||||||||||||:||:.||||.||||||||:|||||||||||.||||:||||||||:.|||
 Frog  2075 TFDYQFQRYGKEAQKCYCGAPNCRGILGGENRVSVRAAGGKMKKERPRKKDTVDGELEALLGNGE 2139

Human  1728 GLSDKNQVLSLSRLMVRIETLEQKLTCLELIQNTHSQSCLKSFLERHGLSLLWIWMAELGDGR-- 1790
            ||||||||||||||||||||:|||||||.|::||.|||.||.||:.||||:||||||||||.|  
 Frog  2140 GLSDKNQVLSLSRLMVRIETVEQKLTCLRLLKNTQSQSYLKWFLDCHGLSVLWIWMAELGDSRGN 2204

Human  1791 -ESNQKLQEEIIKTLEHLPIPTKNMLEESKVLPIIQRWSQTKTAVPPLSEGDGYSSENTSRAHTP 1854
             .::.|||.|:|||||.||||.||||||||:|||||||||.|||:|.||||||||||||||||||
 Frog  2205 TNNSIKLQLELIKTLEMLPIPNKNMLEESKILPIIQRWSQIKTAIPQLSEGDGYSSENTSRAHTP 2269

Human  1855 LNTP----DPSTKLSTEADTDTPKKLMFRRLKIISENSMDSAISDATSELEGKDGKEDLD----- 1910
            ||||    :|:.|||.|||.:||||::.||||||||||||||:|||.||:|.||..|..:     
 Frog  2270 LNTPSNPTEPAAKLSVEADEETPKKIVLRRLKIISENSMDSAVSDAASEIEVKDVPEKTEVPSVV 2334

Human  1911 QLENVPV----EEEEELQSQQLLP-----------QQLPECKVDSETNIEASKLPTSEPEADAEI 1960
            :|::.|:    |.:|||:.:..:|           :|.|..|.:.:..::..||   ||   .:.
 Frog  2335 ELKDAPLPKQEETKEELKPEGAVPPPVKEDPAATEEQKPIIKTEGDPGVDMCKL---EP---LDA 2393

Human  1961 EPKESNGTKLEEPINEETPSQDEEEGVSDVESERSQEQPDKTVDISDLATKLLDSWKDLKEVYRI 2025
            |.||.||.||:|....|||||||||||||||||||||..||.:|:||||||||:|||||||||||
 Frog  2394 EKKEGNGGKLDETSAVETPSQDEEEGVSDVESERSQEPADKILDMSDLATKLLESWKDLKEVYRI 2458

Human  2026 PKKSQTEKENTTTERGRDAVGFRDQTPAPKTPNRSRERDPDKQTQNKEKRKRRSSLSPPSSAYER 2090
            |||:|.|||  |.:|.||:.|....|  ||:..|.|:||.::|:|    ||||.|.|||  || .
 Frog  2459 PKKTQVEKE--TNDRWRDSSGSTYTT--PKSQGRERDRDLERQSQ----RKRRQSPSPP--AY-Y 2512

Human  2091 GTKRPDD-RYDTP-TSKKKVRIKDRNKLSTEERRKLFEQEVAQREAQKQQQQMQNLGMTSPLPYD 2153
            |:||.:| ||||| :||||.|::||||||||||||||||||||:|||||||||||:|:.||:.|:
 Frog  2513 GSKRVEDSRYDTPASSKKKSRLQDRNKLSTEERRKLFEQEVAQKEAQKQQQQMQNMGIASPMTYE 2577

Human  2154 SLGYNA--PHHPFAGYPPGYPMQAYVDPSNPNAGKVLLPTPSMDPVCSPAPYDHAQPLVGHSTEP 2216
            ::.|.|  |..||..||.|||:|::|||:||||||||||||.:|.:.||..:|.:|.:|   ..|
 Frog  2578 AIAYGAQLPPPPFIAYPQGYPLQSFVDPTNPNAGKVLLPTPPLDGIPSPNSFDPSQGMV---VNP 2639

Human  2217 LSAPP-PVPVVPHVAAPVEVSSSQYVAQSDGVVHQDSSVAVLPVPAPGPVQGQNYSVWDSNQQSV 2280
            ...|| .|.||.|||||::|::.|||.|.:.:|.|:::|||||||||.||..|||.|||.|||:|
 Frog  2640 GMMPPQTVSVVQHVAAPMDVTTQQYVTQGETMVPQETNVAVLPVPAPTPVPPQNYGVWDPNQQAV 2704

Human  2281 SV-------QQQYSPAQSQATIYYQGQTCPTVYGVTSPYSQTTPPIVQSYAQPSLQYIQGQQIFT 2338
            ::       |.||.||..||.||||||||..:|||.:.|:|..||:|.:|.|..||||.||||:.
 Frog  2705 TLQPPQQQSQPQYPPAPPQAAIYYQGQTCQPMYGVPAAYAQPPPPVVPTYTQQGLQYITGQQIYA 2769

Human  2339 AHPQGVVVQPAAAVTTIVAPGQPQPLQPSEM-VVTNNLLDLPPPSPPKPKTIVLPPNWKTARDPE 2402
            .||.|||:|...|||||||||||..:|..|| :..||:|||||||||||||||||..||||||||
 Frog  2770 PHPPGVVLQQGPAVTTIVAPGQPPAMQQPEMGMAQNNVLDLPPPSPPKPKTIVLPSGWKTARDPE 2834

Human  2403 GKIYYYHVITRQTQWDPPTWESPGDD-ASLEHEAEMDLGTPTYDENPMKASKKPKTAEADTSSEL 2466
            ||||||||||||||||||.|:|||:: .:||||||||||||||||||||:|||.|||||||||||
 Frog  2835 GKIYYYHVITRQTQWDPPAWDSPGEEGGALEHEAEMDLGTPTYDENPMKSSKKTKTAEADTSSEL 2899

Human  2467 AKKSKEVFRKEMSQFIVQCLNPYRKPDCKVGRITTTEDFKHLARKLTHGVMNKELKYCKNPEDLE 2531
            |||||||||||||||||||||||||||||:|||..|||||||||||||||||||||||||||||:
 Frog  2900 AKKSKEVFRKEMSQFIVQCLNPYRKPDCKMGRINNTEDFKHLARKLTHGVMNKELKYCKNPEDLD 2964

Human  2532 CNENVKHKTKEYIKKYMQKFGAVYKPKEDTELE 2564
            |||||||||||||||||||||.|||||||.::|
 Frog  2965 CNENVKHKTKEYIKKYMQKFGTVYKPKEDIDIE 2997

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SETD2NP_054878.5 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..30 15/45 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 180..211 11/32 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 272..561 170/318 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 607..626 7/52 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 964..995 8/31 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1036..1101 38/69 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1133..1233 23/121 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1264..1352 38/91 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1393..1443 20/50 (40%)
Interaction with TUBA1A. /evidence=ECO:0000269|PubMed:27518565 1418..1714 239/296 (81%)
AWS 1495..1549 CDD:197795 46/53 (87%)
SET_SETD2 1549..1690 CDD:380949 127/140 (91%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1831..1872 33/44 (75%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1921..2142 135/233 (58%)
Low charge region. /evidence=ECO:0000269|PubMed:16118227 2137..2366 132/238 (55%)
WW 2391..2420 CDD:459800 26/28 (93%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2439..2465 23/25 (92%)
Interaction with POLR2A. /evidence=ECO:0000269|PubMed:16314571 2457..2564 99/106 (93%)
SRI 2467..2555 CDD:462404 82/87 (94%)
setd2XP_012820433.2 MSCRAMM_ClfA <216..564 CDD:468110 175/352 (50%)
DMP1 <832..1093 CDD:462128 29/260 (11%)
AWS 1907..1961 CDD:197795 46/53 (87%)
SET_SETD2 1961..2102 CDD:380949 127/140 (91%)
WW 2823..2852 CDD:459800 26/28 (93%)
SRI 2900..2988 CDD:462404 82/87 (94%)

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