DRSC/TRiP Functional Genomics Resources

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Protein Alignment TMEM230 and tmem230a

DIOPT Version :10

Sequence 1:XP_047296088.1 Gene:TMEM230 / 29058 HGNCID:15876 Length:142 Species:Homo sapiens
Sequence 2:NP_001004006.1 Gene:tmem230a / 445502 ZFINID:ZDB-GENE-040822-20 Length:120 Species:Danio rerio


Alignment Length:120 Identity:62/120 - (51%)
Similarity:71/120 - (59%) Gaps:41/120 - (34%)


- Green bases have known domain annotations that are detailed below.


Human    64 MMPSRTNLATGIPSSKVKYSRLSSTDDGYIDLQ-----------------------------GA- 98
            ||.:|.|.|...|::|||||||:.:|:||||||                             |: 
Zfish     1 MMATRNNTAGAAPNNKVKYSRLADSDEGYIDLQFKRTPPKVPYKAIALATFLFLVGSLLIIVGSL 65

Human    99 -----------DRAVPVLIIGILVFLPGFYHLRIAYYASKGYRGYSYDDIPDFDD 142
                       ||.:||||||||:|||||||||||||||||||||||||||||||
Zfish    66 LLAGYIEVTYPDRTIPVLIIGILIFLPGFYHLRIAYYASKGYRGYSYDDIPDFDD 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TMEM230XP_047296088.1 TMEM_230_134 <105..140 CDD:399128 33/34 (97%)
tmem230aNP_001004006.1 TMEM_230_134 <44..118 CDD:399128 38/73 (52%)

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