DRSC/TRiP Functional Genomics Resources

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Protein Alignment GRIK5 and Ir75b

DIOPT Version :9

Sequence 1:XP_011525167.1 Gene:GRIK5 / 2901 HGNCID:4583 Length:982 Species:Homo sapiens
Sequence 2:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster


Alignment Length:675 Identity:154/675 - (22%)
Similarity:258/675 - (38%) Gaps:148/675 - (21%)


- Green bases have known domain annotations that are detailed below.


Human   210 KVSTIIIDANASISHLILRKASELGMTSAFYKYILTTMDFPILHLDGIVED---SSNILGFSMFN 271
            |:|.::| .:.|:|||.|...|         |.|.|  .|..||.|..:.|   :.|||...:| 
  Fly    17 KLSHVLI-LHCSLSHLALLAQS---------KNIFT--QFQPLHSDIQLNDDFLNHNILKLGVF- 68

Human   272 TSHPFYPEFVRSLNMSWRENCEAS-TYLGPALSAALMFDAVHVVVSAVRELNRSQEIGVKPLACT 335
                        |::    ||:.| |.|..|.:........|.::     .:||....|......
  Fly    69 ------------LDI----NCDKSGTVLDMASAKRFFSHRYHWLI-----YDRSMNFSVLESHFK 112

Human   336 SANIW--------PHGTSLMNYLRMVEYDGLTGRV---EFNSKGQR------TN-----YTLRIL 378
            .|.|:        .|.....|:|....|:  .||.   |.|....|      ||     |...:.
  Fly   113 EAQIFVDADVTYVTHDPFSKNFLLYDVYN--KGRQLGGELNITADREIFCNKTNCRVERYLSELY 175

Human   379 EKSRQGHREIGVWYSNRTLAMNATTLDINLSQTLANKTLVVTTILENPYVMRRPNFQALSGNERF 443
            .:|...||:.....:.|..|: .|.|.:|:|      ...:...:.:.|.::...:..|....| 
  Fly   176 TRSALQHRKSFTGLTMRATAV-VTALPLNVS------IKEIFDFMNSKYRIQLDTYARLGYQAR- 232

Human   444 EGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPNGSWT------GMVGELINRQKADLAVAAFT 502
                 ..||::.: .:|:|..|             ..|:      ||:|:|| ..|||||:|.|.
  Fly   233 -----QPLRDMLD-CKFKYIFR-------------DRWSDGNATGGMIGDLI-LDKADLAIAPFI 277

Human   503 ITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFS-------FLDPFSPAVWLFMLLAYLAVSC 560
            .:.:|..   |.:|...  .|:...:.|.|.|...|       ||.|||..|||...|..|...|
  Fly   278 YSFDRAL---FLQPITK--FSVFREICMFRNPRSVSAGLSATEFLQPFSGGVWLTFALLLLLAGC 337

Human   561 VLFLAARLSPYEWYNPHPCLRARPHILENQYTLGNSLWFPVGGFMQQGSEIMPRALSTRCVSGVW 625
            :|::...|...:.:.|               :|..|.....|....||:.:.||::..|      
  Fly   338 LLWVTFILERRKQWKP---------------SLLTSCLLSFGAGCIQGAWLTPRSMGGR------ 381

Human   626 WAFTLIIISS------YTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGSTMTFFQNSRY 684
            .||..::::|      ||:.:.:.|..|.::..:.:...||| :|::.|......|..:.:.|..
  Fly   382 MAFFALMVTSYLMYNYYTSIVVSKLLGQPIKSNIRTLQQLAD-SNLDVGIEPTVYTRIYVETSEE 445

Human   685 QTYQRMW--NYMQSKQ-PSVFVKSTEEGIARVLNSR-YAFLL-ESTMNEYHRR-----LNCNLTQ 739
            ...:.::  ..:.||: |......||.|:..|.:.. :.::. .:|..|:.|:     ..|.|.:
  Fly   446 PDVRDLYRKKVLGSKRSPDKIWIPTEAGVLSVRDQEGFVYITGVATGYEFVRKHFLAHQICELNE 510

Human   740 IGGLLDTKGYGIGMPLGSPFRDEITLAILQLQENNRLEILKRKWWEGGRCPKEEDHRAKGLGMEN 804
            | .|.|.......:...||:.:.|.|:.|::.|.......:|.|.|......:.:|.. .:|:|.
  Fly   511 I-PLRDASHTHTVLAKRSPYAELIKLSELRMLETGVHFKHERSWMETKLHCYQHNHTV-AVGLEY 573

Human   805 IGGIFIVLICGLIIAVFVAVMEFIW 829
            ...:||:|:..:|:.:.:..:|.||
  Fly   574 AAPLFIILLGAIILCMGILGLEVIW 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GRIK5XP_011525167.1 PBP1_iGluR_Kainate_KA1_2 25..399 CDD:107389 50/214 (23%)
ANF_receptor 42..379 CDD:279440 46/194 (24%)
Periplasmic_Binding_Protein_Type_2 414..785 CDD:304360 88/399 (22%)
Lig_chan 546..816 CDD:278489 61/285 (21%)
Ir75bNP_001137966.2 Periplasmic_Binding_Protein_Type_2 253..553 CDD:304360 78/328 (24%)
Lig_chan 343..585 CDD:278489 54/265 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155934
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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