DRSC/TRiP Functional Genomics Resources

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Protein Alignment GRIK5 and Ir76a

DIOPT Version :10

Sequence 1:XP_011525167.1 Gene:GRIK5 / 2901 HGNCID:4583 Length:982 Species:Homo sapiens
Sequence 2:NP_001097647.3 Gene:Ir76a / 40157 FlyBaseID:FBgn0260874 Length:646 Species:Drosophila melanogaster


Alignment Length:683 Identity:122/683 - (17%)
Similarity:206/683 - (30%) Gaps:256/683 - (37%)


- Green bases have known domain annotations that are detailed below.


Human   323 RSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTN-YTLRILEKSRQGHR 386
            |.:.:...||.....:.|.:.:....|...::.|      ||..||...| :|||:.....:.|.
  Fly    40 RLETVHPMPLIIMDWHRWANRSDQDVYDYKIKED------EFEGKGIPYNDWTLRLTVAIERSHC 98

Human   387 E---------------------IGVWYSNRTLAMNATTLD---------------------INLS 409
            |                     ..:|.|.|...|...|.:                     :..|
  Fly    99 ETFIAFQEQIPEFARYFYHASIYSIWRSLRNRFMFVYTKEFEDKKDSYLSGYIFQDQPNILVITS 163

Human   410 QTLANKTLVVTT--------ILENP-----YVMRRPNFQA-------------------LSGNE- 441
            |.|.:.|..:.|        ..:||     |:::|  |.|                   |.|.| 
  Fly   164 QYLNSSTFEIKTNRFVGPRNFNKNPEPVEFYILQR--FDAKGTKATWETQSAMSSKMRNLKGREV 226

Human   442 -----------------------RF--------EGFCVDMLRELAELLRFRYRLRLVEDGLYGAP 475
                                   ||        :|..:.::....||.....::...|...:|..
  Fly   227 VIGIFDYKPFMLLDYEKPPLYYDRFMNTTDVTIDGTDIQLMLIFCELYNCTIQVDTSEPYDWGDI 291

Human   476 EPNGSWTGMVGELINRQKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFL 540
            ..|.|..|:||.:::|:. |..|....:..|..:.:|.:......|::.|... ..|...:...|
  Fly   292 YLNASGYGLVGMILDRRN-DYGVGGMYLWYEAYEYMDMTHFLGRSGVTCLVPA-PNRLISWTLLL 354

Human   541 DPFSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPHPCLRARPHILENQYTLGNSLWF------ 599
            .||...:|:.::|..|..|..|.:..|     |  .|..:.|           ||| |.      
  Fly   355 RPFQFVLWMCVMLCLLLESLALGITRR-----W--EHSSVAA-----------GNS-WISSLRFG 400

Human   600 ---PVGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLAD 661
               .:..|:.|.:..:..:.:.|.|....:...:|:.:.|:..|||.||:..:|...:|...|.|
  Fly   401 CISTLKLFVNQSTNYVTSSYALRTVLVASYMIDIILTTVYSGGLAAILTLPTLEEAADSRQRLFD 465

Human   662 QTNIEYGTIHAGSTMTFFQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLNSRYAFLLESTM 726
            ...|..||..|..|                                     .::.|.|..:...:
  Fly   466 HKLIWTGTSQAWIT-------------------------------------TIDERSADPVLLGL 493

Human   727 NEYHRRLNCNL-------TQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQENNRLEILK---- 780
            .|::|..:.||       .|:|.:::...:|   .||:          .:|.||:.|:.||    
  Fly   494 MEHYRVYDANLISAFSHTEQMGFVVERLQFG---HLGN----------TELIENDALKRLKLMVD 545

Human   781 ------------RKW------------WEGGRCPK----------EEDHRAK------------- 798
                        |.|            |......|          ...||..             
  Fly   546 DIYFAFTVAFVPRLWPHLNAYNDFILAWHSSGFDKFWEWKIAAEYMNAHRQNRIVASEKTNLDIG 610

Human   799 --GLGMENIGGIFIVLICGLIIAVFVAVMEFIW 829
              .||::|..|:.::...|:|.::...:.| :|
  Fly   611 PVKLGIDNFIGLILLWCFGMICSLLTFLGE-LW 642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GRIK5XP_011525167.1 PBP1_iGluR_Kainate_KA1_2 23..401 CDD:380616 20/99 (20%)
Periplasmic_Binding_Protein_Type_2 414..785 CDD:473866 86/478 (18%)
Ir76aNP_001097647.3 None

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