DRSC/TRiP Functional Genomics Resources

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Protein Alignment GRIK5 and Ir7b

DIOPT Version :9

Sequence 1:XP_011525167.1 Gene:GRIK5 / 2901 HGNCID:4583 Length:982 Species:Homo sapiens
Sequence 2:NP_572410.2 Gene:Ir7b / 31690 FlyBaseID:FBgn0029965 Length:655 Species:Drosophila melanogaster


Alignment Length:777 Identity:145/777 - (18%)
Similarity:231/777 - (29%) Gaps:325/777 - (41%)


- Green bases have known domain annotations that are detailed below.


Human   186 ETLSVRMLDDSRDPTPLLKEIRDDKVSTIIIDANASISHLILRKASE--------------LGMT 236
            :||.:....:|:.....|:|:.|..:  :|:..|.....|:|:::.|              |...
  Fly    43 KTLYIYTHTNSQSTGGHLEELLDQVL--MIVPNNLQARRLLLQQSMEYKPYVHAVLALVDGLPSL 105

Human   237 SAFYKYILTTMDFPILHLDGIVEDSSNILGFSMFNTSHPFYPEFVRSLNMSWREN-CEASTYLGP 300
            ||.|..|..|.|.           |..::..||  .:..:..|...:|...||.: ......|.|
  Fly   106 SAIYARIRATQDL-----------SHTLIYMSM--PTDAYGEEMQATLRFLWRLSVLNVGVVLRP 157

Human   301 ALSAALM-----FDAVH--VVVSAVRELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGL 358
            .....||     |.|:|  .|:|| ..:||.| :|.|..|  |.:.:|                 
  Fly   158 PGDHILMVSYFPFSALHGCQVISA-NVVNRYQ-VGTKRWA--SQDYFP----------------- 201

Human   359 TGRVEFNSKGQRTNYTLRILEKSRQGHREIGVWYSNRTLAMNATTLDINLSQTLANKTLVVTTIL 423
                                       .::|.:|.  .|...||..|:                 
  Fly   202 ---------------------------SKLGNFYG--CLLTCATWEDM----------------- 220

Human   424 ENPYVMRRPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPNGSW------- 481
              ||::.||:     |:..|.|....:|:.:||.|.|..       |||        |       
  Fly   221 --PYLVWRPD-----GSGSFVGIEGALLQFMAENLNFTV-------GLY--------WMNKEEVL 263

Human   482 -----TGMVGELINRQKADLAVAAFTITAEREKVIDFSKP---FMT--LGISILYRVHMGRKPGY 536
                 :|.:.:.|....||.::..|.........|.:|:.   ||:  :.::.|...:    ..|
  Fly   264 ATFDESGRIFDEIFGHHADFSLGGFHFKPSAGSEIPYSQSTYYFMSHIMLVTNLQSAY----SAY 324

Human   537 FSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPHPCLRARPHILENQY------TLGN 595
            .....||:|.:|..:.|..:....:|.|..|     |.:.|...|       |.|      |:|.
  Fly   325 EKLSFPFTPLLWRAIGLVLILACLLLMLLVR-----WRHHHELPR-------NPYYELLVLTMGG 377

Human   596 SL---WFPVGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTAN------------------ 639
            :|   |             :|:...:|.|...|...||::.|.|.:.                  
  Fly   378 NLEDRW-------------VPQRFPSRLVLLTWLFATLVLRSGYQSGMYQLLRQDTQRNPPQTIS 429

Human   640 --LAAFLTVQRMEV-----------------------PVESADDLADQ----------TNIEY-- 667
              ||...|:|..||                       .::|...||.|          |..||  
  Fly   430 EVLAQHFTIQLAEVNEARILASLPELRPEQLVYLEGSELQSFPALAQQSGSSARVAILTPYEYFG 494

Human   668 --GTIHAGSTMTFFQNSRYQT-----YQRMWNYM-------------------QSKQPSVFVKST 706
              ..:|..|........|..|     |.|..:::                   .::|....|...
  Fly   495 YFRKVHPMSRRLHLVRERIYTQQLAFYVRRHSHLVGVLNKQIQHAHTHGFLEHWTRQYVSAVDEK 559

Human   707 EEGIARVLNSRYAFLLESTMNEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ 771
            :|.:||:.::.|     ||::                      ||.   |.|...|         
  Fly   560 DESVARIASTSY-----STLD----------------------GID---GDPSLSE--------- 585

Human   772 ENNRLEILKRKWWEGGRCPKEEDH-----RAKGLGMENIGGIFIVLICGLIIAVFVAVMEFI 828
                               .|||.     |...|.|..:..:|.:::...:.||.|.|:|.:
  Fly   586 -------------------SEEDQQVAPVRQNVLSMRELAALFWLILWANLGAVVVFVLELL 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GRIK5XP_011525167.1 PBP1_iGluR_Kainate_KA1_2 25..399 CDD:107389 46/234 (20%)
ANF_receptor 42..379 CDD:279440 43/214 (20%)
Periplasmic_Binding_Protein_Type_2 414..785 CDD:304360 84/477 (18%)
Lig_chan 546..816 CDD:278489 61/364 (17%)
Ir7bNP_572410.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165156265
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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