Sequence 1: | NP_001269399.1 | Gene: | GRIK4 / 2900 | HGNCID: | 4582 | Length: | 956 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_608557.4 | Gene: | GluRIIC / 33275 | FlyBaseID: | FBgn0046113 | Length: | 940 | Species: | Drosophila melanogaster |
Alignment Length: | 967 | Identity: | 259/967 - (26%) |
---|---|---|---|
Similarity: | 431/967 - (44%) | Gaps: | 110/967 - (11%) |
- Green bases have known domain annotations that are detailed below.
Human 8 LVLLPAWLVMVACSPHSLRI---AAILDDPMECSRGERLSITLAKNRINRAPERLGKAKVEVDIF 69
Human 70 ELLR-----DSEYETAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPH--FKVAPEEFV 127
Human 128 KFQFQRFTTLNLHPSNTDISVAVAGILNFFNCTTACLI--CAKAECLLNLEKLLRQFLISKDTLS 190
Human 191 VRMLDDTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNLEFSLQRM 255
Human 256 DSLVDDR----VNILGFSIF-NQSHAFFQEFAQSLNQSWQENCDHVPFTGPALSSALLFDAVYAV 315
Human 316 VTAVQELNRS------QEIGVKPLSCGSA----QIWQHGTSLMNYLRMVELEGLTGHIEFNSKGQ 370
Human 371 RSNYALKILQFTRNGFR---QIGQWHVAEGLSM-----DSHLYASNISDTLFNTTLV--VTTILE 425
Human 426 NPYLMLKGNHQEME--GNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYG-VPEANGTWTGMVG 487
Human 488 ELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISIL-YR-VHMGRKPGYFSFLDPFSPGVWLF 550
Human 551 MLLAYLAVSCVLFLVARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLWFPVGGFMQQGSTIAPRA 615
Human 616 LSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGTIHGGSSMTFFQ 680
Human 681 NSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNS--NYAFLLESTMNEYYRQRNCNLTQIGGL 743
Human 744 LDTKGYGIGMPVGSVFRDEFDLAILQLQENNRLEILKRKWWE--GGKCPKEEDHRA-KGLGMENI 805
Human 806 GGIFVVLICGLIVAIFMAMLEFL----------------------------WTLRHSEATEVSVC 842
Human 843 QEMVTELRSIILCQDSIHPRRRRAAVPPPRPPIPEERRPRGTATLSNGKLCGAGEPD 899 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GRIK4 | NP_001269399.1 | PBP1_iGluR_Kainate_KA1_2 | 26..400 | CDD:107389 | 90/403 (22%) |
ANF_receptor | 43..382 | CDD:279440 | 79/362 (22%) | ||
PBP2_iGluR_kainate_KA1 | 415..785 | CDD:270442 | 133/378 (35%) | ||
Lig_chan | 547..816 | CDD:278489 | 99/273 (36%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 863..889 | 4/25 (16%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 931..956 | ||||
GluRIIC | NP_608557.4 | PBP1_iGluR_Kainate | 26..404 | CDD:107377 | 89/406 (22%) |
Periplasmic_Binding_Protein_Type_1 | <279..363 | CDD:299141 | 14/93 (15%) | ||
PBP2_iGluR_Kainate | 423..794 | CDD:270432 | 133/373 (36%) | ||
Lig_chan | 554..828 | CDD:278489 | 99/274 (36%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165155757 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG60082 | |
OrthoDB | 1 | 1.010 | - | - | D60688at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18966 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.960 |