DRSC/TRiP Functional Genomics Resources

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Protein Alignment GRIK3 and Ir8a

DIOPT Version :10

Sequence 1:NP_000822.2 Gene:GRIK3 / 2899 HGNCID:4581 Length:919 Species:Homo sapiens
Sequence 2:NP_727328.1 Gene:Ir8a / 31867 FlyBaseID:FBgn0052704 Length:936 Species:Drosophila melanogaster


Alignment Length:61 Identity:13/61 - (21%)
Similarity:28/61 - (45%) Gaps:15/61 - (24%)


- Green bases have known domain annotations that are detailed below.


Human   373 SAYGMG--PACLQAKDG--ISVKGANNNNTTNPAPAPSKSPEEMRKLFIQRAKKIDKISRI 429
            |:.|:|  .|.:.||:|  :::.|.|.:..           ||.::..::.....:||:.:
  Fly    14 SSNGIGRSAAVIFAKEGAQVTITGRNEDRL-----------EETKQQILKAGVPAEKINAV 63

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GRIK3NP_000822.2 PBP1_iGluR_Kainate 37..417 CDD:380605 11/47 (23%)
PBP2_iGluR_Kainate_GluR7 433..801 CDD:270441
Ir8aNP_727328.1 PBP2_iGluR_putative 383..786 CDD:270435
Blue background indicates that the domain is not in the aligned region.

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