DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC6A16 and List

DIOPT Version :9

Sequence 1:XP_011525161.2 Gene:SLC6A16 / 28968 HGNCID:13622 Length:781 Species:Homo sapiens
Sequence 2:NP_611364.2 Gene:List / 37157 FlyBaseID:FBgn0034381 Length:564 Species:Drosophila melanogaster


Alignment Length:642 Identity:141/642 - (21%)
Similarity:256/642 - (39%) Gaps:161/642 - (25%)


- Green bases have known domain annotations that are detailed below.


Human   172 QMTEKKESEVLLARPF--WSSKTEYILAQVGFSMKPSCLWRFAYLWLNSGGCSFAAIYIFMLFLV 234
            |:...|:||....:|.  |.:..|::.:.:..|:....:|||.|:...:||.:|...|:..|.::
  Fly     3 QLEISKKSEKPAEKPAEQWGNGLEFLFSCISLSVGLGNIWRFPYIAFQNGGGTFVIPYLIALLVI 67

Human   235 GVPLLFLEMAAGQSMRQGGMGVWKI--IAPWIGGVGYSSFMVCFILGLYFNVVNSWIIFYMSQSF 297
            |.|:.:||::.||..   |.||.|.  :||.:.||.....:.......|::.:.:..:.:...||
  Fly    68 GRPVYYLEISLGQFT---GRGVVKAFDMAPLLKGVALGQVLATAASITYYSSIMALTLRFWLASF 129

Human   298 QFPVPWEKC----------PLTMNSSGFDPECERTTPSIYFWYQQALKASDRIEDGGS-PVYSLV 351
            ...:||.:|          ....||||      :.:|:..::.::.|.....|::|.| |.:.||
  Fly   130 GSELPWSRCWESWGTDCHDGNAQNSSG------KMSPAQLYFEREILHEVPNIDNGLSLPNWQLV 188

Human   352 LPFFLCWCLVGAFMINGLKSTGKIS-------------------------------------DVY 379
            ....:.|.::|..:|.|:||:||.:                                     ::.
  Fly   189 ACLAIAWLVIGGVLIRGIKSSGKAAYFLGVFPYVVLLILLLRAVTLPGAIDGIIYFFKPQWRELL 253

Human   380 NMSVWSLAGGQVLSNTGIGLGSVASLASYMPQSNNCLSDAFLVSVINLLTLLVFTSFNFCVLGFW 444
            |..||..|..||..:..|..|::.:.|||...:.|..:|..:::.::..:.::.....|.:||  
  Fly   254 NPLVWYAAVTQVFFSLAICFGTLITYASYNNFNRNVYNDIVIITTMDSCSSIIAGCITFGILG-- 316

Human   445 ATVITHRCCERNAEILLKLINLGKLPPDAKPPVNLLYNPTSIYNAWLSGLPQHIKSMVLREVTEC 509
                                ||.:                      .:|.|. |.|:|       
  Fly   317 --------------------NLAR----------------------ETGNPD-IGSVV------- 331

Human   510 NIETQFLKASEGPKFAFLSFVEAMS---FLPPSVFWSFIFFLMLLAMGLSSAIGIMQGIITPLQD 571
                     ..|...||:|:.||::   ::|.  .::.:|||||..:|:.|.:|:...|:..::|
  Fly   332 ---------KGGAGLAFISYPEAIAKFEYVPQ--MFAVLFFLMLFVLGIGSTVGMGSCILRVIRD 385

Human   572 TFSFFRKHTKLLIVGVFLLMFVCGLFFTRPSGSYFIRLLSDYWIVFPIIVVVVFETMAVSWAYGA 636
            .|.........|..|:.:|.|...:.:..|.|.:.:.|:..|.:.|..:::.:.|.:||:|.||.
  Fly   386 QFGLRSPPIWKLASGLTVLGFSVSIVYMTPGGQFILNLVDFYGVSFTALILAIGELVAVAWIYGV 450

Human   637 RRFLADLTILLGHPISPIFGWLWPHLC-----PVVLLIIFVTMMVHLCMKPITYMSWDSSTSKEV 696
            .||..|:..::|...    ||.| .||     |.::..:.:.|:  |.|..:.|        |.|
  Fly   451 NRFCEDIKFMMGIET----GWYW-RLCWRFITPGLMTAVLIYML--LDMSALEY--------KGV 500

Human   697 LRPYPPWALLLMITLFAIVILPIPAYFVYC----RIH--------RIPFRPKSGDGP 741
              .||..|.:....|..:.::.:|.:.:|.    |.|        |...:|....||
  Fly   501 --GYPTLAHVFGCFLATLGLIQLPGWAIYAIYKKRGHNGSFWQRIRAACKPSDTWGP 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC6A16XP_011525161.2 None
ListNP_611364.2 SLC6sbd 19..489 CDD:271359 118/546 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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