DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GRID2 and Ir8a

DIOPT Version :9

Sequence 1:XP_011530195.2 Gene:GRID2 / 2895 HGNCID:4576 Length:1035 Species:Homo sapiens
Sequence 2:NP_727328.1 Gene:Ir8a / 31867 FlyBaseID:FBgn0052704 Length:936 Species:Drosophila melanogaster


Alignment Length:827 Identity:193/827 - (23%)
Similarity:343/827 - (41%) Gaps:193/827 - (23%)


- Green bases have known domain annotations that are detailed below.


Human   193 IQEFLDKVSQQG----MDVALQKVENNINKMITTLFDTMRIEELNR-----YRDTLRR------A 242
            :|.|.:.:|..|    :|:.....|...|.:.:.....:|:|.:.|     :.|.:|:      |
  Fly    70 MQRFCEILSTVGASAVIDLTYSHWEEGYNLVRSLGIGYVRLERIMRPFLDMFGDFMRQKRANNVA 134

Human   243 ILVMNPATAKSFITEVVETNLVAFDCHWIIINEEINDVDVQELVRRSIGRLTIIRQTFPVPQNIS 307
            ::.||...|    .|.::..||.:....:|::....|.....|.|        ||...|.|..|:
  Fly   135 MVFMNARDA----VEAMQQMLVGYPFRTLIMDASQTDPGQHFLER--------IRSLRPAPTYIA 187

Human   308 QRCFRGNHRISSTLCDPKDPFAQNMEISNLYIYDTVLLLANAFHKKLE---------DR--KWHS 361
            .                   ||:...::.::   ..:..|:.|.:.||         ||  |:..
  Fly   188 L-------------------FARAAAMNGIF---EKVQKADLFQRPLEWHFVFLDTRDRVFKYRR 230

Human   362 MASLSCIRKNSKP------------WQGG-----RSMLETIKKGGV------------------- 390
            .|.| |.|....|            :.|.     |:||..:.:..:                   
  Fly   231 QAEL-CTRFTLNPRAICRSMPMPDLYCGSGFTMQRAMLLNVLRSLINAAQVSPGYPLAIYQDCNA 294

Human   391 ----SGLTGELEFGENGGNPNVHFE-------------------ILGTNYGEELGRGVRKNERIR 432
                |.::..||..:......||:.                   :.|..:...:..|...:|.  
  Fly   295 TASSSEVSDPLEKDDYNWLDMVHWSNFLAYAPPLPHIQDQFQSPVPGLTFAVNISAGYYSSEH-- 357

Human   433 PQGSTGKIWPQLGCWNPVTGLNGSLTDKKLENNMRGVVLRVVTVLEEPF-VMVSENVLGKPKK-- 494
             :..|     .|..|:.|..:.  |.::.:....|  ..|:.|....|: .:..|...|:..:  
  Fly   358 -EAKT-----DLAAWSSVGEMR--LLNETISPARR--FFRIGTAESIPWSYLRREEGTGELIRDR 412

Human   495 -----YQGFSIDVLDALSNYLGFNYEIYVAPDHKY-GSPQEDGTWNGLVGELVFKRADIGISALT 553
                 ::|:.||.:..||..|.|.:|| |||:..: |...|.|.|:|:||:||....|..|:||.
  Fly   413 SGLPIWEGYCIDFIIRLSQKLNFEFEI-VAPEVGHMGELNELGEWDGVVGDLVRGETDFAIAALK 476

Human   554 ITPDRENVVDFTTRYMDYS-VGVLLRRAEKTVDMFACLAPFDLSLWACIAGTVLLVGLLVYLLNW 617
            :..:||.|:||...|.:.: :.:.:|:..:...:|..:....|.:|..|...::...::::.::.
  Fly   477 MYSEREEVIDFLPPYYEQTGISIAIRKPVRRTSLFKFMTVLRLEVWLSIVAALVGTAIMIWFMDK 541

Human   618 LNPPRLQMG------SMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGAWWLFALIVISSY 676
            .:|...:..      :....||..|.||...||..|||......::.||::.|:|||.:::::::
  Fly   542 YSPYSSRNNRQAYPYACREFTLRESFWFALTSFTPQGGGEAPKAISGRMLVAAYWLFVVLMLATF 606

Human   677 TANLAAFLTITRIESSIQSLQDLSKQTEIPYGTVLDSAVYEH-VRMKGLNPFERDSMYSQMWR-- 738
            |||||||||:.|:::.:|||:.|::|:.|.|..|.||..::: |.||    |..|::| :||:  
  Fly   607 TANLAAFLTVERMQTPVQSLEQLARQSRINYTVVKDSDTHQYFVNMK----FAEDTLY-RMWKEL 666

Human   739 MINRSN-----------------------GSENNVLESQAGIQKV---KYGNYAFVWDAAVLEYV 777
            .:|.|.                       .|...|.:::.|...|   :..:|||:.|:|.::|.
  Fly   667 ALNASKDFKKFRIWDYPIKEQYGHILLAINSSQPVADAKEGFANVDAHENADYAFIHDSAEIKYE 731

Human   778 AINDPDCSFYTIGNTVADRGYGIALQHGSPYRDVFSQRILELQQNGDMDILKHKWWPKNG--QCD 840
            ...  :|:...:|...|::.|.:|:|.||...|..|..|||||::...:.||.|:|.::.  .|.
  Fly   732 ITR--NCNLTEVGEVFAEQPYAVAVQQGSHLGDELSYAILELQKDRFFEELKAKYWNQSNLPNCP 794

Human   841 LYSSVDTKQKGGALDIKSFAGVFCILAAGIVLSCFIAMLETWWNKRK 887
            |  |.|  |:|  :.::|..|||.....|:||:.....:|..:.|:|
  Fly   795 L--SED--QEG--ITLESLGGVFIATLFGLVLAMMTLGMEVLYYKKK 835

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GRID2XP_011530195.2 None
Ir8aNP_727328.1 PBP2_iGluR_putative 383..786 CDD:270435 117/412 (28%)
Lig_chan 520..818 CDD:278489 88/310 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000021
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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