Sequence 1: | NP_981954.2 | Gene: | Ncam2 / 288280 | RGDID: | 1303131 | Length: | 837 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001137799.1 | Gene: | DIP-epsilon / 7354433 | FlyBaseID: | FBgn0259714 | Length: | 467 | Species: | Drosophila melanogaster |
Alignment Length: | 434 | Identity: | 105/434 - (24%) |
---|---|---|---|
Similarity: | 164/434 - (37%) | Gaps: | 105/434 - (24%) |
- Green bases have known domain annotations that are detailed below.
Rat 117 FREVLSPQEFKQGEDAEVVCRVSSSPAPAVSWLY---------HNEEVTTIPDNRFAVLANNN-- 170
Rat 171 -----LQILNINKSDEGIYRCE-GRVEARGEIDFRDIIVIVNVPPAIVMPQKSFNATAERGEEMT 229
Rat 230 LTCKASGSPDPAISWFR-NGKLIEENEKYILKGSNTE-LTVRNIINKDGGSYVCKATN------- 285
Rat 286 ---KAGEDQKQAFLQVFVQPHILQLKNETTSENGHVTLICEAEGEPVPEITWKRAIDGVTFSEGD 347
Rat 348 KSPDGRIEVKGQHGRSS------LHIRDVKLSDSGRYDCEAASRIGGHQRSMHLDIEYAPKFVSN 406
Rat 407 QTMYYSWEGNPINISCDVKANPPASIHWRREKLVLPAKNTTHLKTHSVGRKMILE---IAPTSDN 468
Rat 469 DFGRYNCTATNRI---GTRFQEYILELADVP--------SSPRG 501 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ncam2 | NP_981954.2 | IgI_1_NCAM-2 | 21..113 | CDD:409452 | |
Ig strand B | 38..42 | CDD:409452 | |||
Ig strand C | 50..54 | CDD:409452 | |||
Ig strand E | 76..80 | CDD:409452 | |||
Ig strand F | 90..95 | CDD:409452 | |||
Ig strand G | 104..107 | CDD:409452 | |||
IGc2 | 128..189 | CDD:197706 | 18/77 (23%) | ||
Ig strand B | 130..139 | CDD:409353 | 1/8 (13%) | ||
Ig strand C | 145..153 | CDD:409353 | 3/16 (19%) | ||
Ig strand C' | 156..159 | CDD:409353 | 1/2 (50%) | ||
Ig strand D | 162..167 | CDD:409353 | 2/4 (50%) | ||
Ig strand E | 168..175 | CDD:409353 | 2/13 (15%) | ||
IgI_1_MuSK | 209..298 | CDD:409562 | 29/100 (29%) | ||
Ig strand B | 228..232 | CDD:409562 | 2/3 (67%) | ||
Ig strand C | 241..245 | CDD:409562 | 1/3 (33%) | ||
Ig strand E | 264..268 | CDD:409562 | 2/4 (50%) | ||
Ig strand F | 278..283 | CDD:409562 | 2/4 (50%) | ||
Ig strand G | 291..294 | CDD:409562 | 0/2 (0%) | ||
Ig | 300..397 | CDD:416386 | 28/102 (27%) | ||
Ig strand A | 300..305 | CDD:409353 | 2/4 (50%) | ||
Ig strand A' | 309..313 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 317..325 | CDD:409353 | 3/7 (43%) | ||
Ig strand C | 331..337 | CDD:409353 | 1/5 (20%) | ||
Ig strand C' | 340..343 | CDD:409353 | 0/2 (0%) | ||
Ig strand D | 353..359 | CDD:409353 | 1/5 (20%) | ||
Ig strand E | 362..368 | CDD:409353 | 2/11 (18%) | ||
Ig strand F | 376..384 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 387..397 | CDD:409353 | 1/9 (11%) | ||
Ig_3 | 401..479 | CDD:404760 | 13/80 (16%) | ||
Ig strand B | 418..422 | CDD:409353 | 0/3 (0%) | ||
Ig strand C | 431..435 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 458..462 | CDD:409353 | 1/6 (17%) | ||
Ig strand F | 472..477 | CDD:409353 | 0/4 (0%) | ||
Ig strand G | 486..489 | CDD:409353 | 0/2 (0%) | ||
FN3 | 496..588 | CDD:238020 | 4/14 (29%) | ||
fn3 | 594..678 | CDD:394996 | |||
DIP-epsilon | NP_001137799.1 | IG_like | 59..155 | CDD:214653 | 21/97 (22%) |
Ig | 69..139 | CDD:143165 | 17/71 (24%) | ||
IG_like | 165..249 | CDD:214653 | 26/83 (31%) | ||
IGc2 | 172..237 | CDD:197706 | 24/64 (38%) | ||
IG_like | 267..348 | CDD:214653 | 26/102 (25%) | ||
Ig | 270..339 | CDD:299845 | 22/74 (30%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR12231 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.000 |