DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gas2l2 and Msp300

DIOPT Version :9

Sequence 1:NP_001099293.2 Gene:Gas2l2 / 287570 RGDID:1307868 Length:857 Species:Rattus norvegicus
Sequence 2:NP_001188695.1 Gene:Msp300 / 3771968 FlyBaseID:FBgn0261836 Length:13540 Species:Drosophila melanogaster


Alignment Length:1016 Identity:192/1016 - (18%)
Similarity:330/1016 - (32%) Gaps:332/1016 - (32%)


- Green bases have known domain annotations that are detailed below.


  Rat    67 RHANTVTEAALAFLAEAPERVQKIPM---PQVGVFCNGAAQPGTFQARDNISNFIQWCRKEMGIQ 128
            ||.:...:......|..|||..:.|.   ||.......:.||         |..||..|::...|
  Fly   549 RHQHHHAKTGKKLHAPRPERRGRSPRRRPPQQQKPVESSQQP---------SIEIQLERQQPQEQ 604

  Rat   129 EVLMFETEDLVLRKNVKSV--------VLCLLELGR-RAWR---FGVAAPSLVYLEEEIE--EEL 179
            |.|....:|....::...|        ||..|||.| ||.:   ..|...|.:.:::.::  .|:
  Fly   605 EQLFLPADDRTRSRSPMWVPGSTSYAEVLRGLELERIRAEQQAAQAVQGRSDLTIQDVVDASAEV 669

  Rat   180 RRDLDLPSPDPPPPVPPARRPCHFHNLDQMV---QSLVSHCTC-------PVQFSMVKISD---G 231
            ...:.:|.|||.||:...::| ....|:|.:   .:|:.:.|.       |:.:.:...::   .
  Fly   670 AGSIYIPQPDPEPPIKETQQP-QPPQLEQYITETSTLLDYSTTQQQEQKPPINYEVPMTAEEIAA 733

  Rat   232 KY-------------RVGDSNTLIFIRILRSHVMVRVGGGWDTLGHYLDKHDPCRCTSLSHKPGS 283
            .|             .|.||....|:          .|...|.......::...:...:...|..
  Fly   734 TYLQPDPQLYQTMYENVADSGQWGFV----------TGSTTDPQQQQAPQNYYEQIMQMQQYPIQ 788

  Rat   284 FLK---PPG-------------PPVQHEVKVQDGPSQPQPL------------MTISRSQSPLPP 320
            :.:   ||.             |..|.|......|::|..:            .:..:.|...|.
  Fly   789 YQQVAVPPAATTQYQLLAGYYQPVAQTEAYSTVYPAEPNQIYYAPQATEYSQEFSQQQEQQVEPM 853

  Rat   321 VDW------KTYTSSSRKLRPPTPSSSG---------------PRSEFPARARTPR--------- 355
            :::      :||.....:.....||::|               .:|..|....|.:         
  Fly   854 LEYQQEAVEQTYLLDPYRAESTLPSTTGNSVLDRVVTTLASIVQQSAEPLTTSTQQIEPLATVVQ 918

  Rat   356 -------EMAPFLRSQEKPTLSQRMSSPGPQL-----------SSPCRGP-----DLQSTLSERR 397
                   |....||..|...|  .:..|.|.:           :.|...|     ::::|.|:.|
  Fly   919 SEPYYIEEHVQMLRPVEPQEL--ELDEPRPDITFGQFEVDAIETIPLDEPQAPQTEVETTESQVR 981

  Rat   398 VNRSPGELPRGRTPTSWVPKEADSQGAHTKAPIPQRLQ----IPETTSKKT--PAR---GPSPPP 453
            ..::       .|.|::|.:.::.........|.|:.|    ||:|....|  |..   .|.|..
  Fly   982 TQQT-------ITTTTYVTETSNVSEQTQPTVIMQQTQEVIAIPDTPEIPTEEPTNVVVHPKPQR 1039

  Rat   454 RSSSLASPHTIWLPDQGAS------------PEISEPMSAQSSSPGKGLTKIPIRLSPARPPTPG 506
            ||:....|..|   ..|::            ..:.:|.|.|.:         |:||: :.||...
  Fly  1040 RSNQQVRPQDI---STGSTYAEVLFGLHHKEHPVFQPSSQQPT---------PVRLT-SSPPLQR 1091

  Rat   507 RGSLGTEGGGSMQRGSLSSRAL--AGNLDRST---HGHHSVDVSKDHQKVIQISSGTEDPRSLGT 566
            :    ||..|.:...:.:|:..  ...:::||   |.:.:||......|.::..:..| |..:..
  Fly  1092 K----TEQAGPISNTAFTSKTTQPGRQVEKSTTWEHKNDNVDSRNSRSKRVRHEAQPE-PLPIKQ 1151

  Rat   567 QERKERYTSLPLGRT-REPALYDNLKEELVANMKLLEVGAACTQGTRSQAIPRSGVYVPSLGGMW 630
            ..||:       ||| |:|...|.             .|.|..:.......|...|.|.......
  Fly  1152 STRKD-------GRTVRKPQSADT-------------NGIASVETKVVVDTPAPSVVVEETSKPE 1196

  Rat   631 PEPR-------GPYDKVIQELVQGPPRLLKVDLKAWKVGSECLP------------------RPI 670
            |:||       ...|.|::..|.       :.:.:.|.....||                  .|.
  Fly  1197 PKPRKSKKSKKTTTDNVVESAVD-------ISVPSKKDTQSVLPSVGKKETVVEKSVIKKTVEPS 1254

  Rat   671 VNPGSPKEEQVSRERGTRRKARPSAQGTTVKTTSPARGQDCSTLPVSANLKAPTHSCSDPSSDKA 735
            |.|..|......||    :|.:|..:..|.::..|       .|.||.  .|||..    ...:.
  Fly  1255 VEPVEPVPVPSKRE----KKHKPVKEKETPQSDEP-------VLEVSP--VAPTRK----EKKQV 1302

  Rat   736 KVCLGKGKRTLR----------KPQKVPS-------------IYKLKLRP----------RIRP- 766
            |..:...:.|:|          ||..||.             :.|..|:|          .:.| 
  Fly  1303 KTVVKNVETTIRNEPLIEKETSKPADVPKTQVKQTKSVVETVVEKKVLQPVVTEDAELAKSVTPA 1367

  Rat   767 ---RRDHR-------PE--KRPSR--IPKPLVYPFLGPARTAPGSRLLKATLGGTGGDVNGVGKK 817
               ::|.:       ||  |:|:.  |.|.:|.|.:  ..|...|::.:.....|.      .||
  Fly  1368 APSKKDKKKNKTVVEPEVIKKPTEIVIEKEVVTPTV--IETTDVSQVQEQPTSPTS------SKK 1424

  Rat   818 EEEKKK---ETSISLESSIQPSESREPMQLDGT-PLPPEEE 854
            |:::.|   |||:.:..:::|:     :||:.. |||.:::
  Fly  1425 EKKQSKKIVETSVIVTENVEPA-----VQLEAAPPLPTKKD 1460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gas2l2NP_001099293.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
CH 33..159 CDD:237981 27/103 (26%)
GAS2 206..274 CDD:366964 12/93 (13%)
PHA03307 278..>527 CDD:223039 60/350 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 282..572 69/396 (17%)
Interaction with ADORA2A. /evidence=ECO:0000250|UniProtKB:Q5SSG4 432..857 108/527 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 670..716 10/45 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 759..857 28/125 (22%)
Msp300NP_001188695.1 SPEC 17..220 CDD:238103
SPEC 9546..9732 CDD:295325
sbcc 11187..12008 CDD:129705
SMC_prok_B 11614..12442 CDD:274008
SPEC 11994..12156 CDD:295325
SPEC 12374..12564 CDD:295325
Lipase_chap 12376..12529 CDD:281297
SPEC 12703..12923 CDD:238103
SPEC 12816..13032 CDD:295325
SPEC 13196..13374 CDD:238103
KASH 13484..13540 CDD:287506
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0516
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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