DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GRK6 and grk-1

DIOPT Version :10

Sequence 1:NP_002073.2 Gene:GRK6 / 2870 HGNCID:4545 Length:589 Species:Homo sapiens
Sequence 2:NP_509676.1 Gene:grk-1 / 181212 WormBaseID:WBGene00001708 Length:642 Species:Caenorhabditis elegans


Alignment Length:633 Identity:346/633 - (54%)
Similarity:435/633 - (68%) Gaps:49/633 - (7%)


- Green bases have known domain annotations that are detailed below.


Human     1 MELENIVANTVLLKAREGGGGNRKGKSKKWRQMLQFPHISQCEELRLSLERDYHSLCERQPIGRL 65
            ||:||||||||.:|||| .||.:|||||||:..|||||.::|..|:..:|..|..:.|:||||:|
 Worm     1 MEIENIVANTVYIKARE-SGGQKKGKSKKWKNYLQFPHYTECLPLKTEIEVTYAFVVEKQPIGKL 64

Human    66 LFREFC-ATRPELSRCVAFLDGVAEYEVTPDDKRKACGRQLTQNFLS--HTGPDLIPE------- 120
            ||.||| ||..:..:|..||..|.|||.:.||.:..  |.|..:.:|  |:.|:..|.       
 Worm    65 LFHEFCQATNSQYHQCCQFLTKVEEYETSDDDGQSR--RDLASSIVSLLHSKPEDNPSGSQDEQE 127

Human   121 -----VPRQLVTNCTQRLEQG-----PCKDLFQELTRLTHEYLSVAPFADYLDSIYFNRFLQWKW 175
                 :..::::.|....:..     |..|:|.|..|||.:||:.|||.::.:|:||:|||||||
 Worm   128 FWCSFLSDEVISTCITTADSATHDDEPRSDIFTEPYRLTCQYLTDAPFKEFAESMYFHRFLQWKW 192

Human   176 LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK 240
            ||::||.|:|||.|||||||||||||||||||:|||||.|||||||:|||..|.::|||||||::
 Worm   193 LEKRPVDKHTFRLYRVLGKGGFGEVCACQVRASGKMYALKKLEKKRVKKRHAETLSLNEKQILQR 257

Human   241 VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
            :||.||||||||||||||||||||||||||||||:|::...||.|.|..||||||..||:.||.|
 Worm   258 INSPFVVSLAYAYETKDALCLVLTLMNGGDLKFHLYNLMPGGFDEKRVQFYAAEITLGLQHLHSE 322

Human   306 RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWA 370
            ||:|||||||||||||.||:|||||||||.:.:.:.||||||||||||||:||||||::..|||.
 Worm   323 RILYRDLKPENILLDDFGHVRISDLGLAVEIKDNEPIKGRVGTVGYMAPEIVKNERYSYGVDWWG 387

Human   371 LGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCR 435
            :|||:||||.|::||:|||:|:|||||||.|:|..|:|||:||..||:||..||.|:|..|||||
 Worm   388 VGCLIYEMIEGKAPFRQRKEKVKREEVERRVREDQEKYSEKFSEAARTLCRGLLHKEPGFRLGCR 452

Human   436 -----GGSAREVKEHPLF---------KKLNFKRLGAGMLEPPFKPDPQAIYCKDVLDIEQFSTV 486
                 ...|.|::.||.|         :.:.:|::.||.:.|||.|||:|:|.||||||||||||
 Worm   453 RVGRPEDGAEEIRAHPFFNTADTVTGREPVPWKKMEAGKVTPPFCPDPRAVYAKDVLDIEQFSTV 517

Human   487 KGVELEPTDQDFYQKFATGSVPIPWQNEMVETECFQELNVF-GLDGSV-----PPDLDWKGQPPA 545
            |||.|:.||..||.||.||.|.||||:||:|||||.|||.| ..||:|     |..::...:...
 Worm   518 KGVRLDATDTQFYGKFNTGCVSIPWQSEMIETECFAELNTFHDEDGNVMWNLRPDGINMDERRNG 582

Human   546 PPKKGLLQRLFSRQRIAVETA------ATARKSSPPASSPQPEAPTSS 587
            ..|.|...|||.::.|.|..:      ....:..||.:|.|..|..||
 Worm   583 TSKPGFFSRLFRKKNIEVTKSLHDLSHLGVEQQQPPKTSTQTPAVRSS 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GRK6NP_002073.2 N-terminal 1..185 88/203 (43%)
RGS 35..179 CDD:470619 61/163 (37%)
STKc_GRK6 185..469 CDD:270779 196/297 (66%)
grk-1NP_509676.1 RGS 34..196 CDD:470619 61/163 (37%)
Protein Kinases, catalytic domain 202..500 CDD:473864 196/297 (66%)

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