DRSC/TRiP Functional Genomics Resources

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Protein Alignment GPR39 and PK1-R

DIOPT Version :10

Sequence 1:NP_001499.1 Gene:GPR39 / 2863 HGNCID:4496 Length:453 Species:Homo sapiens
Sequence 2:NP_001014620.1 Gene:PK1-R / 41713 FlyBaseID:FBgn0038201 Length:430 Species:Drosophila melanogaster


Alignment Length:417 Identity:109/417 - (26%)
Similarity:172/417 - (41%) Gaps:97/417 - (23%)


- Green bases have known domain annotations that are detailed below.


Human    29 IKITLILVYLIIFVMGLLGNSATIRVTQVLQKKGYLQKEVTDHMVSLACSDILVFLIGMPMEFYS 93
            |.|.:.:||.:||:.|::||.:|   ..|::|...:......::.|||.||.|:.|.|:|.| .|
  Fly    19 IVIPVTVVYSLIFITGVVGNIST---CIVIKKNRSMHTATNYYLFSLAISDFLLLLSGVPQE-VS 79

Human    94 IIWN--PLTTSSYTLSCKLHTFLFEACSYATLLHVLTLSFERYIAICHPFRYKAVSGPCQVKLLI 156
            .||:  |.....|.  |.....|.|..:.||:|.:...:.||||||||||..:|:|...:...:|
  Fly    80 YIWSKYPYVFGEYI--CIGRGLLAETSANATVLTITAFTVERYIAICHPFLGQAMSKLSRAIRII 142

Human   157 GFVWVTSALVALPLLFAMGTEYPLVNVPSHRGL-TCN--RSSTRHHEQPETSNMSICTNLSSRWT 218
            ..||:.:.:.|:|.....|.|:       :.|: .|.  |...:|.                   
  Fly   143 VLVWIMAIVTAIPQAAQFGIEH-------YSGVEQCGIVRVIVKHS------------------- 181

Human   219 VFQSSIFGAFV----VYLVVLLSVAFMCWNMMQV-----LMKSQK-------------------- 254
             ||.|.|..|:    :.||:.|.:....:....|     :.:.|:                    
  Fly   182 -FQLSTFIFFLAPMSIILVLYLLIGVHLYRSTLVEGPASVARRQQLKSVPSDTILYRYGGSGTAM 245

Human   255 -----GSLAG-----GTRPPQLRKSESEESRTARRQTIIFLRLIVVTLAVCWMPNQIRRIMAAAK 309
                 ||.||     |....||.......:....|:.:..|..:||...:||.|...:|::|...
  Fly   246 SFNGGGSGAGTAGLMGGSGAQLSSVRGRLNHYGTRRVLRMLVAVVVCFFLCWAPFHAQRLIAIYA 310

Human   310 P--------KHDWTRSYFRAYMILLPFSETFFYLSSVINPLLYTVSSQQFRRVFVQVL----CCR 362
            |        :|::      .|.::...|...:|||:.||||||.:.|.:||..|..||    ..:
  Fly   311 PARGAKLRDQHEF------VYTVMTYVSGVLYYLSTCINPLLYNIMSHKFREAFKAVLFGKKVSK 369

Human   363 LSLQHANH--EKRLRVHAHSTTDSARF 387
            .||...|:  .:|||....:::.:.||
  Fly   370 GSLNSRNNIESRRLRRALTNSSQTQRF 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GPR39NP_001499.1 7tmA_GPR39 31..355 CDD:320263 97/375 (26%)
TM helix 1 31..58 CDD:320263 9/26 (35%)
TM helix 2 68..94 CDD:320263 10/25 (40%)
TM helix 3 108..138 CDD:320263 11/29 (38%)
TM helix 4 150..172 CDD:320263 5/21 (24%)
TM helix 5 217..246 CDD:320263 8/32 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 255..274 7/23 (30%)
TM helix 6 276..306 CDD:320263 8/29 (28%)
TM helix 7 323..348 CDD:320263 10/24 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 415..453
PK1-RNP_001014620.1 7tmA_capaR 21..358 CDD:320262 97/375 (26%)
TM helix 1 21..48 CDD:320262 10/29 (34%)
TM helix 2 55..81 CDD:320262 11/26 (42%)
TM helix 3 94..124 CDD:320262 11/29 (38%)
TM helix 4 136..158 CDD:320262 5/21 (24%)
TM helix 5 178..207 CDD:320262 9/48 (19%)
TM helix 6 277..307 CDD:320262 8/29 (28%)
TM helix 7 326..351 CDD:320262 10/24 (42%)
Blue background indicates that the domain is not in the aligned region.

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