DRSC/TRiP Functional Genomics Resources

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Protein Alignment GPR39 and PK2-R2

DIOPT Version :9

Sequence 1:NP_001499.1 Gene:GPR39 / 2863 HGNCID:4496 Length:453 Species:Homo sapiens
Sequence 2:NP_731788.1 Gene:PK2-R2 / 41638 FlyBaseID:FBgn0038139 Length:599 Species:Drosophila melanogaster


Alignment Length:437 Identity:109/437 - (24%)
Similarity:175/437 - (40%) Gaps:103/437 - (23%)


- Green bases have known domain annotations that are detailed below.


Human    32 TLILVYLIIFVMGLLGNSATIRVTQVLQKKGYLQKEVTDHMVSLACSDILVFLIGMPMEFYSIIW 96
            ||.:.|.:||:.|:|||..|   ..|:.:..::......::.:||.||:::...|||.:.|: :|
  Fly    68 TLSVGYALIFIAGVLGNLIT---CIVISRNNFMHTATNFYLFNLAISDMILLCSGMPQDLYN-LW 128

Human    97 NPLTTSSYTLS---CKLHTFLFEACSYATLLHVLTLSFERYIAICHPFRYKAVSGPCQVKLLIGF 158
            :|   .:|..|   |.|.:.|.|..:.||:|.:...:.|||||||||||...:|...:....|..
  Fly   129 HP---DNYPFSDSICILESVLSETAANATVLTITAFTVERYIAICHPFRQHTMSKLSRAVKFIFA 190

Human   159 VWVTSALVALP-------LLFAMGTEYPLVNVPSHRGLTCNRSSTRHHEQPETSNMSICTNLSSR 216
            :|:.:.|:|||       ::..|||.                                ||..:..
  Fly   191 IWIAALLLALPQAIQFSVVMQGMGTS--------------------------------CTMKNDF 223

Human   217 WT-VFQSSIFGAF------VVYLVVLLSVAFMCWNMMQVLMKSQKGSLAGGTRPPQLRKSESEES 274
            :. ||..|.|..|      :..|.||:.|......::|.|.:          |...:.:..|.::
  Fly   224 FAHVFAVSGFLFFGGPMTAICVLYVLIGVKLKRSRLLQALPR----------RCYDVNRGISAQT 278

Human   275 RTARRQTIIFLRLIVVTLAVCWMPNQIRRIMAAAKPKHDWTRSYFRAYMILLPF-SETFFYLSSV 338
            |..|     .|..:.|...:||.|...:|:||...........:|.....:|.: |...::||:.
  Fly   279 RVIR-----MLVAVAVAFFICWAPFHAQRLMAVYGSTSGIESQWFNDVFSILDYTSGVLYFLSTC 338

Human   339 INPLLYTVSSQQFRRVFVQVLCCRLSLQHANHEK---------------RLRVHAHSTTDSARFV 388
            ||||||.:.|.:||..|...|.....|...|..:               .||:|   ||||.|..
  Fly   339 INPLLYNIMSHKFREAFKVTLARHFGLGGKNQGRGLPHTYSALRRNQTGSLRLH---TTDSVRTT 400

Human   389 QRPL------LFASRRQS-------SARRTEKIFLSTFQSEAEPQSK 422
            ...:      |..|...|       .:.|..::.|.:.|.:.:.:|:
  Fly   401 MTSMATTTTGLNGSANGSGNGTTTGQSVRLNRVSLDSVQMQGQNRSR 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GPR39NP_001499.1 7tmA_GPR39 31..355 CDD:320263 90/340 (26%)
TM helix 1 31..58 CDD:320263 10/25 (40%)
TM helix 2 68..94 CDD:320263 8/25 (32%)
TM helix 3 108..138 CDD:320263 12/29 (41%)
TM helix 4 150..172 CDD:320263 6/28 (21%)
TM helix 5 217..246 CDD:320263 9/35 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 255..274 2/18 (11%)
TM helix 6 276..306 CDD:320263 7/29 (24%)
TM helix 7 323..348 CDD:320263 10/25 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 415..453 1/8 (13%)
PK2-R2NP_731788.1 7tm_1 83..344 CDD:278431 78/314 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D380940at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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