DRSC/TRiP Functional Genomics Resources

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Protein Alignment PNPLA1 and atgl-1

DIOPT Version :10

Sequence 1:NP_001361552.1 Gene:PNPLA1 / 285848 HGNCID:21246 Length:572 Species:Homo sapiens
Sequence 2:NP_741195.1 Gene:atgl-1 / 175910 WormBaseID:WBGene00015484 Length:751 Species:Caenorhabditis elegans


Alignment Length:169 Identity:35/169 - (20%)
Similarity:54/169 - (31%) Gaps:52/169 - (30%)


- Green bases have known domain annotations that are detailed below.


Human     5 DALADLPEWYGIKGMQAHWIGDCVGCH------LDFTLKVDGEDTGEKLTAYTATPEAIYGISHV 63
            |....:|.:.|:|         .:||:      .:..|......||..|...|.|...:..::|:
 Worm    47 DVKPKVPGYCGVK---------AIGCNRSDELLAEVALHSYNSQTGTNLELMTVTQVMLQSVAHI 102

Human    64 -------AISPSHGLLHGCSSVKKALQKALVPGRDCLTPVMAVSMLTLQEVPIVIMANPDLEGSL 121
                   |..|::..|   ||::..|..|.|...:.|..|....               .||||.
 Worm   103 NYHMILDAFDPANNSL---SSIEICLWDAAVKNNEKLRLVTTFC---------------SLEGSG 149

Human   122 DS------------KIGIPSTSSEDTRLAQALGLPYSEV 148
            |.            ..|:.....:|..|:.:..|.|.||
 Worm   150 DKGSQWDPNGVDVLYTGVMPKWLDDGALSGSEKLHYYEV 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PNPLA1NP_001361552.1 Pat_PNPLA1 2..388 CDD:132858 35/169 (21%)
GXSXG. /evidence=ECO:0000255|PROSITE-ProRule:PRU01161 51..55 2/3 (67%)
DGA/G. /evidence=ECO:0000255|PROSITE-ProRule:PRU01161 172..174
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 290..457
Atrophin-1 <295..>493 CDD:460830
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 489..532
atgl-1NP_741195.1 Pat_PNPLA_like 12..252 CDD:132843 35/169 (21%)
Blue background indicates that the domain is not in the aligned region.

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