DRSC/TRiP Functional Genomics Resources

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Protein Alignment GPER1 and K03H6.5

DIOPT Version :9

Sequence 1:NP_001035055.1 Gene:GPER1 / 2852 HGNCID:4485 Length:375 Species:Homo sapiens
Sequence 2:NP_500093.3 Gene:K03H6.5 / 186965 WormBaseID:WBGene00019370 Length:434 Species:Caenorhabditis elegans


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GPER1NP_001035055.1 7tmA_GPER1 60..335 CDD:320120
TM helix 1 62..86 CDD:320120
TM helix 2 95..116 CDD:320120
TM helix 3 131..153 CDD:320120
TM helix 4 176..192 CDD:320120
TM helix 5 212..235 CDD:320120
TM helix 6 258..280 CDD:320120
TM helix 7 303..328 CDD:320120
K03H6.5NP_500093.3 7tmA_FMRFamide_R-like 39..343 CDD:320109
TM helix 1 40..64 CDD:320109
TM helix 2 72..94 CDD:320109
TM helix 3 115..137 CDD:320109
TM helix 4 160..176 CDD:320109
TM helix 5 221..244 CDD:320109
TM helix 6 274..299 CDD:320109
TM helix 7 311..336 CDD:320109
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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