DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RNF149 and SPAC57A7.09

DIOPT Version :9

Sequence 1:XP_005263977.1 Gene:RNF149 / 284996 HGNCID:23137 Length:428 Species:Homo sapiens
Sequence 2:NP_593372.1 Gene:SPAC57A7.09 / 2542187 PomBaseID:SPAC57A7.09 Length:372 Species:Schizosaccharomyces pombe


Alignment Length:383 Identity:82/383 - (21%)
Similarity:138/383 - (36%) Gaps:117/383 - (30%)


- Green bases have known domain annotations that are detailed below.


Human    15 VLALALLALAL------CVPGARGRALEWFSAVVNIEYVDPQTNLTVWSVSESGRFGDSSPKEGA 73
            ::.|.::||.|      .:|       :.|:|..::....|..|:|:|  |....||.......|
pombe    17 IILLEVIALDLGVLDNIFIP-------KRFAASTDVAIQLPDRNVTLW--SRQAVFGKHFTNASA 72

Human    74 HGLVGVPWAPGG---DLEGCA----PDTRFFV--------------------------PEPGGRG 105
            ..::.: :.|..   |:.||.    .|..:|.                          .:.||..
pombe    73 TTVINL-YLPSNFQEDMSGCPNRNDTDASYFYENDIIDYDIEYIEQKSYSSKPSARVQKDDGGES 136

Human   106 AAPWV---ALVARGGCTFKDKVLVAARRNASAVVLYNEE-------RY---------GNITLPMS 151
            ....:   .||.||.||:.||.|.|.|.....|::.:..       .|         ..:.:|..
pombe   137 KDEAILDFLLVQRGKCTYFDKALEAQRLGFKGVIVGDNRSPSSFRLHYMVAPDKVDESKVHIPSL 201

Human   152 HAGTGNIVV----IMISYPKGREILELVQKGIPVTMTIGVGTRHVQEFISGQSVVFV------AI 206
            ...|.:..:    ::.||   |:.|:|..|               .|.:......|:      .|
pombe   202 FVSTSSYNLLWSDLLHSY---RQPLKLYAK---------------PEELGDMFWPFLLCFSPSII 248

Human   207 AFITMMIISLAWLIFYY-----IQRFL-----YTGSQIGSQSHRKETKK-----VIGQLLLHTVK 256
            ..||:..:::...|..|     .:||:     .|.|:.|..|..:|.:.     .:..|:..:.:
pombe   249 MLITVQALAIRKFIRTYRTKSKTRRFIEDLPSRTISREGFYSEEEEIENSTQNGELVPLMDESTR 313

Human   257 HGEKGIDVDAENCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHR-TCPMCKLDV 313
            ....|::     |.:|:|:|...|.:..|||||.|||.||..|::|:| .||.|..:|
pombe   314 RATFGVE-----CVICLESFTKGDKVVALPCKHEFHRPCIAKWIVDYRHACPTCNTEV 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RNF149XP_005263977.1 PA_GRAIL_like 43..185 CDD:239037 37/197 (19%)
UPF0233 <204..>235 CDD:299753 9/46 (20%)
zf-RING_2 267..310 CDD:290367 20/43 (47%)
SPAC57A7.09NP_593372.1 COG5540 1..369 CDD:227827 82/383 (21%)
Peptidases_S8_S53 <144..211 CDD:299169 15/66 (23%)
zf-RING_2 320..362 CDD:290367 20/46 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4628
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm53615
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.