DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MCHR1 and AstC-R1

DIOPT Version :9

Sequence 1:NP_005288.4 Gene:MCHR1 / 2847 HGNCID:4479 Length:353 Species:Homo sapiens
Sequence 2:NP_649040.2 Gene:AstC-R1 / 40020 FlyBaseID:FBgn0036790 Length:483 Species:Drosophila melanogaster


Alignment Length:329 Identity:104/329 - (31%)
Similarity:168/329 - (51%) Gaps:33/329 - (10%)


- Green bases have known domain annotations that are detailed below.


Human    13 NASNTSDGPDNLTSAGSPPRTGSI----SYINIIMPSVFGTICLLGIIGNSTVIFAVVKKSKLHW 73
            :.|:|....::|.....|.....|    |:.::....::|.:|::|:.||:.||:.|::.||:  
  Fly    46 SGSSTIQPEESLYGTDLPTYQHCIATRNSFADLFTVVLYGFVCIIGLFGNTLVIYVVLRFSKM-- 108

Human    74 CNNVPDIFIINLSVVDLLFLLGMPFMIHQLMGNGVWHFGETMCTLITAMDANSQFTSTYILTAMA 138
             ..|.:|:|:||:|.|..||:|:||::: .|....|.|||.||.......:.:.|||:..|..|:
  Fly   109 -QTVTNIYILNLAVADECFLIGIPFLLY-TMRICSWRFGEFMCKAYMVSTSITSFTSSIFLLIMS 171

Human   139 IDRYLATVHPISSTKFRKPSVATLVICLLWALSFISITPVWLYARLIPFPGGA-VGCGIRLPNPD 202
            .|||:|..|||||.::|...:|.:|..:.|:.|.:.:.||.|||..:....|. ..|.|..|   
  Fly   172 ADRYIAVCHPISSPRYRTLHIAKVVSAIAWSTSAVLMLPVILYASTVEQEDGINYSCNIMWP--- 233

Human   203 TDLY------WFTLYQFFLAFALPFVVITAAYVRILQRMTSSVAP---ASQRSIRLRTKRVTRTA 258
             |.|      .|.||.|||.||.|...|.:.|..::::: .||.|   ...:..|...::|||..
  Fly   234 -DAYKKHSGTTFILYTFFLGFATPLCFILSFYYLVIRKL-RSVGPKPGTKSKEKRRAHRKVTRLV 296

Human   259 IAICLVFFVCWAPYYVLQL-------TQLSISRPTLTFVYLYNAAISLGYANSCLNPFVYIVLCE 316
            :.:..|:.:||.|:::.|:       .|..:||..:....|..|.:   |:||.:||.:|..|.|
  Fly   297 LTVISVYILCWLPHWISQVALIHSNPAQRDLSRLEILIFLLLGALV---YSNSAVNPILYAFLSE 358

Human   317 TFRK 320
            .|||
  Fly   359 NFRK 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MCHR1NP_005288.4 7tmA_MCHR1 41..322 CDD:320460 98/297 (33%)
TM helix 1 43..67 CDD:320460 8/23 (35%)
TM helix 2 79..100 CDD:320460 11/20 (55%)
TM helix 3 117..139 CDD:320460 5/21 (24%)
TM helix 4 162..178 CDD:320460 3/15 (20%)
TM helix 5 206..229 CDD:320460 11/28 (39%)
TM helix 6 255..277 CDD:320460 6/21 (29%)
TM helix 7 290..315 CDD:320460 8/24 (33%)
AstC-R1NP_649040.2 7tm_4 88..368 CDD:304433 97/287 (34%)
7tm_1 94..353 CDD:278431 89/270 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24229
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X22
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
43.970

Return to query results.
Submit another query.