DRSC/TRiP Functional Genomics Resources

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Protein Alignment WDR62 and wdr62

DIOPT Version :10

Sequence 1:NP_001077430.1 Gene:WDR62 / 284403 HGNCID:24502 Length:1523 Species:Homo sapiens
Sequence 2:NP_001429277.1 Gene:wdr62 / 570949 ZFINID:ZDB-GENE-060503-291 Length:1520 Species:Danio rerio


Alignment Length:1582 Identity:675/1582 - (42%)
Similarity:902/1582 - (57%) Gaps:201/1582 - (12%)


- Green bases have known domain annotations that are detailed below.


Human    39 PICLRRRTRLSTASEETVQNRVSLEKVLGITAQNSSGLTCDPGTGHVAYLAGCVVVILDPKENKQ 103
            |...||:||.|  ....:.|||.|||||||||.:||.|||||.||.|||.||||:|||.||:|||
Zfish    32 PANTRRKTRQS--HRRDIHNRVVLEKVLGITASSSSALTCDPNTGLVAYPAGCVIVILSPKKNKQ 94

Human   104 QHIFNTARKSLSALAFSPDGKYIVTGENGHRPAVRIWDVEEKNQVAEMLGHKYGVACVAFSPNMK 168
            .|||||:||:.||||||.:|||:||||:||.|.||:|||.|:.||||:..|||||:|||||||..
Zfish    95 THIFNTSRKTFSALAFSQNGKYLVTGESGHMPCVRVWDVAERTQVAEVQCHKYGVSCVAFSPNGS 159

Human   169 HIVSMGYQHDMVLNVWDWKKDIVVASNKVSCRVIALSFSEDSSYFVTVGNRHVRFWFLEVSTETK 233
            :|||:|||||..::||:|||..|:||||||.||:.:|||||:|||||.|||||:||:|:.|.|.:
Zfish   160 YIVSVGYQHDRTVSVWEWKKGTVIASNKVSSRVLGVSFSEDNSYFVTAGNRHVKFWYLDASKERR 224

Human   234 VTSTVPLVGRSGILGELHNNIFCGVACGRGRMAGSTFCVSYSGLLCQFNEKRVLEKWINLKVSLS 298
            |.|||||:||||:|||..|:.|||:|||||.||.||:|::::|||||||..|.|:.|::||.:.:
Zfish   225 VNSTVPLIGRSGLLGEHQNSQFCGLACGRGSMASSTYCITHTGLLCQFNSNRQLDSWVDLKTTSA 289

Human   299 SCLCVSQELIFCGCTDGIVRIFQAHSLHYLANLPKPHYLGVDVAQGLEPSFLFHRKAEAVYPDTV 363
            .||.||...:||||.||.||:|....|.|:..|.:||.|||||:||.:|..||....||.||||:
Zfish   290 QCLSVSGTFVFCGCADGTVRVFSPQDLRYITTLHRPHCLGVDVSQGTQPGHLFSANPEAQYPDTL 354

Human   364 ALTFDPIHQWLSCVYKDHSIYIWDVKDINRVGKVWSELFHSSYVWNVEVYPEFED-QRACLPSGS 427
            ||||||:.:.|:|||.|||:|:|||:||..||||:|.|:||..||:||.|||.|| ..|||..||
Zfish   355 ALTFDPVTKHLTCVYNDHSVYVWDVRDIRNVGKVYSALYHSGCVWSVETYPELEDPSAACLSPGS 419

Human   428 FLTCSSDNTIRFWNLDSSPDSH-----WQKNIFSNTLLKVVYVENDIQHLQDMSHFPDRGSENGT 487
            |||||||||||.|. ..||.||     .:.|::|..::::|||::|.|:|:..:    ..:|.|.
Zfish   420 FLTCSSDNTIRLWR-SESPQSHSAGLGLRHNLYSQDIVRIVYVDDDTQYLKAEA----VKAEGGA 479

Human   488 PMDVKAGVRVMQVSPDGQHLASGDRSGNLRIHELHFMDELVKVEAHDAEVLCLEYSKPETGLTLL 552
            ..|.|:|:||:.:||||||||:|||||||||..|.|||||.|:||||:|||||.:|..||||.||
Zfish   480 GQDGKSGIRVLGISPDGQHLAAGDRSGNLRIFGLQFMDELQKIEAHDSEVLCLAFSPAETGLHLL 544

Human   553 ASASRDRLIHVLNVEKNYNLEQTLDDHSSSITAIKFAG-NRDIQMISCGADKSIYFRSAQQGSDG 616
            ||||||||||:.:::...||.||:.|||:||||:||.| |.::.|:|||||||:|||||::.|||
Zfish   545 ASASRDRLIHIFDMDSKCNLVQTVYDHSASITAVKFTGLNSELCMVSCGADKSVYFRSAEKTSDG 609

Human   617 LHFVRTHHVAEKTTLYDMDIDITQKYVAVACQDRNVRVYNTVNGKQKKCYKGSQGDEGSLLKVHV 681
            |.|.|:||:.|||||||||:|.|:.:.|:||||||:||||..:||.|||:|||..|:|:||||.:
Zfish   610 LVFSRSHHIVEKTTLYDMDLDATRTHTAIACQDRNIRVYNVKSGKMKKCFKGSMNDDGTLLKVQL 674

Human   682 DPSGTFLATSCSDKSISVIDFYSGECIAKMFGHSEIITSMKFTYDCHHLITVSGDSCVFIWHLGP 746
            ||||.|||||||||:|.|.|:.||||:|.:||||||:|.|||:.||.||||||||||||:|.|..
Zfish   675 DPSGMFLATSCSDKNICVFDYESGECVATLFGHSEIVTGMKFSQDCRHLITVSGDSCVFVWRLDS 739

Human   747 EITNCMKQHLLEIDHRQQQ-----QHTNDKKRSGHPRQDTYVSTPSEIHSLSPGEQTEDDLEEEC 806
            ::||.|::.|.|   |:||     |....|:..  .|::||::.|  .::|:..|  ||.|..|.
Zfish   740 QMTNSMRKRLAE---RKQQAGLRLQRAPTKQEV--IRRETYITVP--CNALTHME--EDGLMAEV 795

Human   807 EPEEML---KTPSK-DSLDP--DPRCLLTNGKLPLWAKRLLGDDDVADGLAFHAKRSYQPHGRWA 865
            .||:.|   :||.: ||.|.  |...|.||||:|:|.:||.|:.: .||.....:..|||.||||
Zfish   796 NPEDGLEDCRTPDRLDSTDASLDSVVLQTNGKMPMWVRRLGGEGE-KDGTGAANRVQYQPQGRWA 859

Human   866 ERAGQEPLKTILD--AQDLDCYFTP---MKPESLENSILDSLEPQSLASLL------SESESPQE 919
            .::....::|:|:  :..|....||   |..|.||..  ....||||.|||      .|.|..:|
Zfish   860 VQSDPLAIRTVLEMKSNQLPLSHTPSRVMGEEELEED--PRFHPQSLDSLLDEDLEDGEEEEEEE 922

Human   920 AGRGH-----------PSFL--PQQKE-------SSEASELILYSLEAEVTVTGTDSQYCRKEVE 964
            ...|.           |.||  |..:|       |||.:..|||...:....||......:...|
Zfish   923 KICGSSRDGFSSSLHGPEFLQFPHGEENFNPELSSSEKTGYILYPANSTALSTGEGEFDVKALCE 987

Human   965 AGPGDQQGDSYLRVSSDSPKDQSPPEDSGESEADLECSFAAIHSPAPPPDPAPRFATSLPHFPGC 1029
            ...||                  |.|:  |...|..||   ..||....|.        ||    
Zfish   988 GTAGD------------------PDEE--ELSPDSACS---AESPESHSDQ--------PH---- 1017

Human  1030 AGPTEDELSLPEGPSVPSSSLPQTPEQE-KFLRHHFETLTESPCRELFPAALGDVEASEAEDHFF 1093
               .:|..||.:..|..||.:.:..|:. ..||.||:||..: ..|.|...|..::.: .|.:|.
Zfish  1018 ---DQDTDSLSQVSSTGSSGVEEDEEESGTLLRQHFDTLGVA-TNEKFNTDLSSLQPT-TESNFL 1077

Human  1094 NPRLSISTQFLSSLQKASRFTHTFPPRATQCLVKSP----EVKLMDRGGSQPRAGTGYASPDRTH 1154
            ||||||||:|||..|  ||| .:...|...||...|    :.:.:|:...:|:           |
Zfish  1078 NPRLSISTRFLSRFQ--SRF-RSAACRPAACLSSIPDESTDSQTLDQTMEKPK-----------H 1128

Human  1155 VLAAGKAEETLEAWRPPPPCLTSLASCVPASSVLP--------TDRNLPTPTSAPT-PGLAQGVH 1210
            :..:|..||..:........::|..|..|  |:|.        |::|..|..|..: ||:.....
Zfish  1129 LSNSGSVEEKEKTVIKRRSSMSSRRSSNP--SLLRWKNALGEITNKNQSTTQSTTSAPGVLSNKS 1191

Human  1211 APSTC---------SYMEATASSRARISRSISLGDSEGPIVATLAQPLRRPSSVGELASLGQELQ 1266
            ..::|         |||..||||||:|::|.|        |.:|...:...:.:..|.::....:
Zfish  1192 TSNSCDASVTRSRQSYMGPTASSRAKINQSNS--------VESLNLCISEETPLNALPNVEHSKE 1248

Human  1267 AITTATTPSLDSE--GQEPALRSWGNHEARANLRLTLSSACDGLLQP-PVDTQPGVTVPAVSFPA 1328
            .:...::|.:.|.  .|.|.|   |||.|||:|||.|.......|.| .:.::.|......|...
Zfish  1249 NMIPPSSPVVSSAPLHQSPVL---GNHSARASLRLDLIGHNRASLSPVSLKSRRGKVEHHDSPRR 1310

Human  1329 PSPVEESALRLHGSAFRPSLP------APE---SPGLPAHPSNPQLPEAR-------PGIPGGTA 1377
            .:.|..:.:|..|...|..:.      ||.   |.|......:|.:.:..       ..:.....
Zfish  1311 QALVTPTEMRSLGKESRKQISNIEQSLAPSDRLSTGAGMFARSPMVRQTSDTVFVDLQSVRSDQT 1375

Human  1378 SLLEPTSGALGLLQGSPARWSEPWVPVE-ALPPSPLELSRVGNILHRLQTTFQEALDLYRVLVSS 1441
            |:..|.:.|:.  |.:........:|.| .|....|.:.....:::.|..|..:|.|||..|.|.
Zfish  1376 SVSSPMTNAVS--QNNQDSADNNSIPEETGLSAEALSVQMCKEMVNELWHTIHKATDLYSKLCSI 1438

Human  1442 GQVDTGQQQARTELVSTFLWIHSQLEAECLVGTSVAPAQALPSPGPPSPPTLYPLA--SPDLQ-- 1502
            .::...|:|.:..|...|:.:.|:|.:.|            |....||..:.:|::  ||..|  
Zfish  1439 PKLSEQQEQMKGVLQEVFVGVQSELNSIC------------PQKTQPSTKSTHPISEDSPGRQLR 1491

Human  1503 -----ALLEHYSELLVQAVRRK 1519
                 ||||.|||:|:..:..|
Zfish  1492 DDRAVALLEKYSEMLLLRMTEK 1513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WDR62NP_001077430.1 WD40 42..567 CDD:441893 323/530 (61%)
WD 1 109..150 27/40 (68%)
WD40 repeat 114..153 CDD:293791 26/38 (68%)
WD 2 153..194 26/40 (65%)
WD40 repeat 159..197 CDD:293791 24/37 (65%)
WD 3 196..234 25/37 (68%)
WD40 repeat 201..239 CDD:293791 24/37 (65%)
WD40 repeat 270..332 CDD:293791 28/61 (46%)
WD 4 291..330 17/38 (45%)
WD40 repeat 350..399 CDD:293791 31/48 (65%)
WD 5 357..396 25/38 (66%)
WD40 <364..744 CDD:441893 240/386 (62%)
WD 6 402..450 32/53 (60%)
WD40 repeat 407..442 CDD:293791 26/35 (74%)
WD 7 490..529 28/38 (74%)
WD40 repeat 498..532 CDD:293791 24/33 (73%)
WD 8 532..574 27/41 (66%)
WD40 repeat 538..578 CDD:293791 24/39 (62%)
WD 9 578..618 27/40 (68%)
WD40 repeat 583..620 CDD:293791 24/37 (65%)
WD 10 626..665 25/38 (66%)
WD40 repeat 632..667 CDD:293791 22/34 (65%)
WD 11 671..713 27/41 (66%)
WD40 repeat 676..712 CDD:293791 25/35 (71%)
WD 12 714..752 26/37 (70%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 762..824 23/72 (32%)
WD 13 803..846 20/48 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 908..935 12/52 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 962..1055 20/92 (22%)
WD 14 1137..1178 5/40 (13%)
PHA03247 <1170..1413 CDD:223021 62/280 (22%)
WD 15 1260..1298 11/39 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1344..1382 7/53 (13%)
wdr62NP_001429277.1 None

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