DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC13A5 and plt1

DIOPT Version :10

Sequence 1:NP_808218.1 Gene:SLC13A5 / 284111 HGNCID:23089 Length:568 Species:Homo sapiens
Sequence 2:NP_596410.1 Gene:plt1 / 2540279 PomBaseID:SPBC3B8.04C Length:867 Species:Schizosaccharomyces pombe


Alignment Length:575 Identity:128/575 - (22%)
Similarity:217/575 - (37%) Gaps:157/575 - (27%)


- Green bases have known domain annotations that are detailed below.


Human    11 FKSFVILFVTPLLLLPLVILMPAKFVR----CAYVIILMAIYWCTEVIPLAVTSLMPVLLFPLFQ 71
            |.|.:...:|.:::..|::..|....|    |..:::::::.|.||.|||.|||.:...:....:
pombe   403 FNSTIATLITIIVIFILLLSFPVIDNREQNNCLALLVMVSLLWATEAIPLFVTSFLVPFMTVFLK 467

Human    72 IL-----------DSRQVCVQYM-KDTNMLFLGGLIVAVAVERWNLHKRIALRTLLWVGAKPARL 124
            ||           :|.:|....| ..|.:|.|||..:|.|:.::::.||:|...|...|.||..:
pombe   468 ILRDENGSPLSGKESTKVIFSSMWNPTIVLLLGGFTIAAALSKYHIAKRLATSILAHAGRKPRSV 532

Human   125 MLGFMGVTALLSMWISNTATTAMMVPIVEAILQQMEATSAATEAGLELVDKGKAKELPGSQVIFE 189
            :|..|.|....||||||.|...:...|::.:|:.:.|.|                          
pombe   533 LLTNMFVAMFASMWISNVAAPVLCFSIIQPLLRNLPAES-------------------------- 571

Human   190 GPTLGQQEDQERKRLCKAMTLCICYAASIGGTATLTGTGPNVVLLGQMNELFPDSKDLVNFASWF 254
                         ...|.:.:.|..|:::||.|:...:..|:|.|..|:       ....:..||
pombe   572 -------------DFAKILIVGIALASNVGGIASPISSPQNIVALQNMD-------PAAGWGEWF 616

Human   255 AFAFPNMLVMLLFAWLWLQFVYMRFNFKKSWGCGLESKKNEKAALKVLQEEYRKLGPL-----SF 314
            |.:.|..|:.:...|..|.|             ||            |::|:..|..:     :|
pombe   617 AVSIPVSLLCIFSIWFLLSF-------------GL------------LKDEHITLAKIRSTKDTF 656

Human   315 AEINVLICFFLL--VILW-----FSRDPGFMPGWLTVAWVEGETKYVSDATVAIFVATLLFIVPS 372
            ..:...|....:  ::||     |..             |.|:...::...:.:|..|.|.    
pombe   657 TGVQWFISIVTIGTIVLWCLERRFDE-------------VFGDMGVIALVPIIVFFGTGLL---- 704

Human   373 QKPKFNFRSQTEEERKTPFYPPPLLDWKVTQEKVPWGIVLLLGGGFALAKGSEASGL----SVWM 433
            .|..||                          ...|.:::|..||.||.|...:|||    ::.:
pombe   705 TKEDFN--------------------------NFLWTVIVLAMGGVALGKVVSSSGLLELIALKI 743

Human   434 GKQMEPLHAVPPAAITLILSLLVAVFTECTSNVATTTLFLPIFASM-SRSIGLNPLYIMLPCTLS 497
            |..:..|:..   .:.||.|.|..|.:...|::....:.|||...: ||....:|...:|...:.
pombe   744 GNAVSSLNTF---RVLLIFSALTLVVSSFISHIVAAMVVLPIVHEVGSRLADPHPRLFVLASGMM 805

Human   498 ASFAFMLPVATPPN--AIVFT----YGHLKVADMVKTGVIMNIIGVFCVFLAVNT 546
            .|.|..||.:..||  ||:..    ..:|||:|.:|.|:...:|. |.:.|.:.|
pombe   806 CSLAMALPTSGFPNMTAIMMENEAGKRYLKVSDFLKAGIPATLIS-FVILLLIGT 859

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC13A5NP_808218.1 CitMHS <11..164 CDD:460985 48/168 (29%)
CitT 91..547 CDD:440239 105/479 (22%)
plt1NP_596410.1 COG5408 1..301 CDD:227695
SLC13_permease 435..858 CDD:238535 120/540 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.