DRSC/TRiP Functional Genomics Resources

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Protein Alignment TSEN54 and Tsen54

DIOPT Version :10

Sequence 1:NP_997229.2 Gene:TSEN54 / 283989 HGNCID:27561 Length:526 Species:Homo sapiens
Sequence 2:XP_038942802.1 Gene:Tsen54 / 690308 RGDID:1597379 Length:602 Species:Rattus norvegicus


Alignment Length:478 Identity:370/478 - (77%)
Similarity:397/478 - (83%) Gaps:14/478 - (2%)


- Green bases have known domain annotations that are detailed below.


Human    20 ARELFAARSRSQKLPQRSHGPKDFLPDGSAAQAERLRRCREELWQLLAEQRVERLGSLVAAEWRP 84
            |.||.||||||||||||||||||||||||.|||||||.||:||||||||:|||||||||||||||
  Rat    24 ASELRAARSRSQKLPQRSHGPKDFLPDGSEAQAERLRLCRQELWQLLAEERVERLGSLVAAEWRP 88

Human    85 EEGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIHLFHQDLPLSIQEAYQLLLTDHT 149
            |||||||.|||||||||||:||:|||||||||||||||||||.||:||||||||||||||||:.|
  Rat    89 EEGFVELTSPAGKFWQTMGYSEEGRQRLHPEEALYLLECGSIQLFYQDLPLSIQEAYQLLLTEDT 153

Human   150 VTFLQYQVFSHLKRLGYVVRRFQPSSVLSPYERQLNLDASVQHLEDGDGKRKRSSSSPRSINKKA 214
            ::|||||||||||||||||||||.|||:||||||||||...|.||||.||||||||. ||:||||
  Rat   154 LSFLQYQVFSHLKRLGYVVRRFQLSSVVSPYERQLNLDGYAQCLEDGSGKRKRSSSC-RSVNKKA 217

Human   215 KALDNSLQPKSLAASSPPPCSQPSQCPEEKPQESSPMKGPGGPFQLLGSLGPSPGPAREGVGCSW 279
            |||.|||.|.|||.||||.|.|.|..|||||::|||.:|...|.|.|||..|.|.|.||..||..
  Rat   218 KALQNSLPPVSLADSSPPACDQSSPYPEEKPRDSSPEQGSELPMQFLGSPEPCPDPGREDAGCDQ 282

Human   280 ESGRAENGVTGAGKRRWNFEQISFPNMASDSRHTLLRAPAPELLPANVAGRETDAESWCQKLNQR 344
            ||.:.|||..|..|.|||||:|||||||||||||||.||||||||.||.||.|||||||||||||
  Rat   283 ESDKIENGAKGTPKPRWNFERISFPNMASDSRHTLLPAPAPELLPVNVIGRGTDAESWCQKLNQR 347

Human   345 KEKLSRREREHHAEAAQFQEDVNADPEVQRCSSWREYKELLQRRQVQRSQRRAPHLWGQPVTPLL 409
            :||||||:||..||..||:||||||||||.||:|:||||||:|||:||||.|.||||||.|||||
  Rat   348 REKLSRRDREQQAEVRQFREDVNADPEVQGCSTWQEYKELLRRRQMQRSQPRPPHLWGQSVTPLL 412

Human   410 SPGQASSPAVVLQHISVLQTTHLPDGGARLLEKSGGLEIIFDVYQADAVATFRKNNPGKPYARMC 474
            :|..|.|||.|||.|||||||||.|||.|||||||||||.|||||||||||||||:|||||.|||
  Rat   413 NPDTADSPAAVLQRISVLQTTHLADGGYRLLEKSGGLEISFDVYQADAVATFRKNSPGKPYVRMC 477

Human   475 ISGFD-------------EPVPD 484
            |||::             .|||:
  Rat   478 ISGYEMTECRQPPPARPSTPVPE 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TSEN54NP_997229.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 27..47 19/19 (100%)
tRNA_int_end_N2 63..130 CDD:463754 61/66 (92%)
tRNA_int_end_N2 <116..>169 CDD:480673 46/52 (88%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 192..290 61/97 (63%)
Tsen54XP_038942802.1 tRNA_int_end_N2 67..134 CDD:463754 61/66 (92%)
tRNA_int_end_N2 <120..>173 CDD:480673 46/52 (88%)

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