DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PRTG and Prtg

DIOPT Version :9

Sequence 1:NP_776175.2 Gene:PRTG / 283659 HGNCID:26373 Length:1150 Species:Homo sapiens
Sequence 2:NP_001032740.2 Gene:Prtg / 315806 RGDID:1307157 Length:1193 Species:Rattus norvegicus


Alignment Length:1153 Identity:1041/1153 - (90%)
Similarity:1086/1153 - (94%) Gaps:15/1153 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAPPLRPLARLRPPGMLLRALLLLLLLSPL---PGVWCFSELSFVKEPQDVTVTRKDPVVLDCQA 62
            ||||:|       ||||  .|||||||.||   ||||.||||.|:|||||.||||||||.|||||
  Rat     1 MAPPVR-------PGML--PLLLLLLLPPLGSVPGVWSFSELFFMKEPQDATVTRKDPVFLDCQA 56

Human    63 HGEVPIKVTWLKNGAKMSENKRIEVLSNGSLYISEVEGRRGEQSDEGFYQCLAMNKYGAILSQKA 127
            |||.||||||||||||:||||||:|||||||||||.|||||||||||||||||:|||||||||||
  Rat    57 HGEGPIKVTWLKNGAKLSENKRIQVLSNGSLYISEAEGRRGEQSDEGFYQCLAVNKYGAILSQKA 121

Human   128 HLALSTISAFEVQPISTEVHEGGVARFACKISSHPPAVITWEFNRTTLPMTMD-RITALPTGVLQ 191
            ||.|||||||||.|:||||.|||||||:|||||.||||||||||||.|||||| |:||||:||||
  Rat   122 HLTLSTISAFEVHPVSTEVPEGGVARFSCKISSTPPAVITWEFNRTALPMTMDSRVTALPSGVLQ 186

Human   192 IYDVSQRDSGNYRCIAATVAHRRKSMEASLTVIPAKESKSFHTPTIIAGPQNITTSLHQTVVLEC 256
            |||....|:|.|||:|||.||:|||||||||::||.|::||:.|||||.|||:|.||||||||||
  Rat   187 IYDAGPEDAGKYRCVAATHAHKRKSMEASLTIVPANETRSFYMPTIIASPQNVTASLHQTVVLEC 251

Human   257 MATGNPKPIISWSRLDHKSIDVFNTRVLGNGNLMISDVRLQHAGVYVCRATTPGTRNFTVAMATL 321
            ||||.||||||||||||||||||||||||||||:||||:||||||||||||||||||||||||||
  Rat   252 MATGYPKPIISWSRLDHKSIDVFNTRVLGNGNLIISDVKLQHAGVYVCRATTPGTRNFTVAMATL 316

Human   322 TVLAPPSFVEWPESLTRPRAGTARFVCQAEGIPSPKMSWLKNGRKIHSNGRIKMYNSKLVINQII 386
            ||||||||||||||||||||||||||||||||||||||||||||:||||||||||||||||||||
  Rat   317 TVLAPPSFVEWPESLTRPRAGTARFVCQAEGIPSPKMSWLKNGRRIHSNGRIKMYNSKLVINQII 381

Human   387 PEDDAIYQCMAENSQGSILSRARLTVVMSEDRPSAPYNVHAETMSSSAILLAWERPLYNSDKVIA 451
            |||||||||||||||||:|||||||||||||||||||||||||||||||||||||||||||||||
  Rat   382 PEDDAIYQCMAENSQGSVLSRARLTVVMSEDRPSAPYNVHAETMSSSAILLAWERPLYNSDKVIA 446

Human   452 YSVHYMKAEGLNNEEYQVVIGNDTTHYIIDDLEPASNYTFYIVAYMPMGASQMSDHVTQNTLEDV 516
            |||||||||||||||||||:||||||||||||||.||||||||||||||||||||||||||||||
  Rat   447 YSVHYMKAEGLNNEEYQVVLGNDTTHYIIDDLEPDSNYTFYIVAYMPMGASQMSDHVTQNTLEDV 511

Human   517 PLRPPEISLTSRSPTDILISWLPIPAKYRRGQVVLYRLSFRLSTENSIQVLELPGTTHEYLLEGL 581
            ||||||||||||||||||||||||||||||||||||||||||||||||||:|||||.||||||||
  Rat   512 PLRPPEISLTSRSPTDILISWLPIPAKYRRGQVVLYRLSFRLSTENSIQVVELPGTVHEYLLEGL 576

Human   582 KPDSVYLVRITAATRVGLGESSVWTSHRTPKATSVKAPKSPELHLEPLNCTTISVRWQQDVEDTA 646
            :||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||.||.|
  Rat   577 EPDSVYLVRITAATRVGLGESSVWTSHRTPKATSVKAPKSPELHLEPLNCTTISVRWLQDTEDPA 641

Human   647 AIQGYKLYYKEEGQQENGPIFLDTKDLLYTLSGLDPRRKYHVRLLAYNNIDDGYQADQTVSTPGC 711
            ||:||||:||||||||:|||||||.||||||||||||||||||||||||::||||||||||||||
  Rat   642 AIRGYKLFYKEEGQQEHGPIFLDTGDLLYTLSGLDPRRKYHVRLLAYNNLEDGYQADQTVSTPGC 706

Human   712 VSVRDRMVPPPPPPHHLYAKANTSSSIFLHWRRPAFTAAQIINYTIRCNPVGLQNASLVLYLQTS 776
            |||||||||||||||||||||||||||||||||||||.||:||||||||||||||||||||||||
  Rat   707 VSVRDRMVPPPPPPHHLYAKANTSSSIFLHWRRPAFTTAQVINYTIRCNPVGLQNASLVLYLQTS 771

Human   777 ETHMLVQGLEPNTKYEFAVRLHVDQLSSPWSPVVYHSTLPEAPAGPPVGVKVTLIEDDTALVSWK 841
            ||||||||||||||||||||||||||||||||||||:||||||.|||||||||||||||||||||
  Rat   772 ETHMLVQGLEPNTKYEFAVRLHVDQLSSPWSPVVYHTTLPEAPTGPPVGVKVTLIEDDTALVSWK 836

Human   842 PPDGPETVVTRYTILYASRKAWIAGEWQVLHREGAITMALLENLVAGNVYIVKISASNEVGEGPF 906
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   837 PPDGPETVVTRYTILYASRKAWIAGEWQVLHREGAITMALLENLVAGNVYIVKISASNEVGEGPF 901

Human   907 SNSVELAVLPKETSESNQRPKRLDSADAKVYSGYYHLDQKSMTGIAVGVGIALTCILICVLILIY 971
            |||||||||||:.||||||||||||:|||||||||||||||||||||||||||||||||||||||
  Rat   902 SNSVELAVLPKDASESNQRPKRLDSSDAKVYSGYYHLDQKSMTGIAVGVGIALTCILICVLILIY 966

Human   972 RSKARKSSASKTAQNGTQQLPRTSASLASGNEVGKNLEGAVGNEESLMPMIMPNSFIDAKGGTDL 1036
            ||||||||||||.|:|||.|.|.|||:|:|:::|||||.|..||||.:|| ||:.||||||||||
  Rat   967 RSKARKSSASKTTQSGTQPLSRASASVAAGSDMGKNLERATENEESSVPM-MPSCFIDAKGGTDL 1030

Human  1037 IINSYGPIIKNNSKKKWFFFQDSKKIQVEQPQRRFTPAVCFYQPGTTVLISDEDSPSSPGQTTSF 1101
            ||||||||||||.||||.||||:|||:|||.|||.|..|||||||||||||||||||||||||||
  Rat  1031 IINSYGPIIKNNPKKKWRFFQDTKKIKVEQTQRRITQTVCFYQPGTTVLISDEDSPSSPGQTTSF 1095

Human  1102 SRPFG-VAADTEHSANSEGSHETGDSGRFSHESNDEIHLSSVISTTPP 1148
            .|||| ...|||||||||||||||||||||||||||||||||||:|||
  Rat  1096 PRPFGPTTLDTEHSANSEGSHETGDSGRFSHESNDEIHLSSVISSTPP 1143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PRTGNP_776175.2 Ig 40..130 CDD:299845 80/89 (90%)
Ig 139..223 CDD:299845 66/84 (79%)
IG_like 141..223 CDD:214653 65/82 (79%)
IG_like 241..323 CDD:214653 76/81 (94%)
IGc2 250..309 CDD:197706 55/58 (95%)
I-set 327..412 CDD:254352 82/84 (98%)
Ig 345..412 CDD:299845 64/66 (97%)
FN3 419..512 CDD:238020 90/92 (98%)
FN3 517..610 CDD:238020 89/92 (97%)
fn3 624..699 CDD:278470 65/74 (88%)
FN3 726..814 CDD:238020 85/87 (98%)
FN3 821..911 CDD:238020 89/89 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 981..1002 13/20 (65%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1086..1150 58/64 (91%)
PrtgNP_001032740.2 Ig 32..124 CDD:416386 82/91 (90%)
Ig strand A 32..35 CDD:409353 2/2 (100%)
Ig strand A' 38..44 CDD:409353 4/5 (80%)
Ig strand B 48..58 CDD:409353 8/9 (89%)
Ig strand C 62..68 CDD:409353 5/5 (100%)
Ig strand C' 70..73 CDD:409353 2/2 (100%)
Ig strand D 78..83 CDD:409353 3/4 (75%)
Ig strand E 85..91 CDD:409353 5/5 (100%)
Ig strand F 103..110 CDD:409353 6/6 (100%)
Ig strand G 114..124 CDD:409353 9/9 (100%)
Ig 131..218 CDD:416386 68/86 (79%)
Ig strand B 146..150 CDD:409353 3/3 (100%)
Ig strand C 159..163 CDD:409353 3/3 (100%)
Ig strand E 183..187 CDD:409353 3/3 (100%)
Ig strand F 197..202 CDD:409353 3/4 (75%)
Ig strand G 211..214 CDD:409353 2/2 (100%)
Ig_3 230..302 CDD:404760 65/71 (92%)
Ig strand B 247..251 CDD:409353 3/3 (100%)
Ig strand C 260..264 CDD:409353 3/3 (100%)
Ig strand E 282..286 CDD:409353 3/3 (100%)
Ig strand F 296..301 CDD:409353 4/4 (100%)
I-set 322..407 CDD:400151 82/84 (98%)
Ig strand C 352..357 CDD:409353 4/4 (100%)
Ig strand C' 359..362 CDD:409353 2/2 (100%)
Ig strand D 367..371 CDD:409353 3/3 (100%)
Ig strand E 373..378 CDD:409353 4/4 (100%)
Ig strand F 387..394 CDD:409353 6/6 (100%)
Ig strand G 398..407 CDD:409353 7/8 (88%)
FN3 414..507 CDD:238020 90/92 (98%)
FN3 512..605 CDD:238020 89/92 (97%)
fn3 619..694 CDD:394996 65/74 (88%)
FN3 721..809 CDD:238020 85/87 (98%)
FN3 816..906 CDD:238020 89/89 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 974..1018 28/44 (64%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1078..1193 60/66 (91%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83677542
Domainoid 1 1.000 406 1.000 Domainoid score I10531
eggNOG 00.000 Not matched by this tool.
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H54453
Inparanoid 1 1.050 2083 1.000 Inparanoid score I1289
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG44155
OrthoDB 1 1.010 - - D1010015at2759
OrthoFinder 1 1.000 - - FOG0010268
OrthoInspector 1 1.000 - - oto140210
orthoMCL 1 0.900 - - OOG6_106549
Panther 1 1.100 - - LDO PTHR12231
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X7677
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1515.410

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