DRSC/TRiP Functional Genomics Resources

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Protein Alignment GPR12 and npr-19

DIOPT Version :10

Sequence 1:NP_005279.1 Gene:GPR12 / 2835 HGNCID:4466 Length:334 Species:Homo sapiens
Sequence 2:NP_508147.2 Gene:npr-19 / 182130 WormBaseID:WBGene00015364 Length:420 Species:Caenorhabditis elegans


Alignment Length:337 Identity:71/337 - (21%)
Similarity:134/337 - (39%) Gaps:66/337 - (19%)


- Green bases have known domain annotations that are detailed below.


Human    42 LVVNPWDIVLCTSGTLISCENAIVVLIIFHNPSLR-APMFLLIGSLALADLLAGIGLITNFVFAY 105
            :.|:.|.|:|..:  |||  |.:::..|..:.::| |..:..|.|:|:.|:|.....:.:.|.|.
 Worm    30 IAVSIWTIMLLYA--LIS--NMLILAGIARSSTMRSATSYWFIISIAICDILMTFISLGHLVPAT 90

Human   106 LLQSEATKLVTIGLIVASF------SASVCSLLAITVDRYLSLYYALTYHSERTVTFTYVMLVML 164
            ....|..:..:|..||..|      ...|..|..:..:|::|:.|.:.|  :...:.|..:.::|
 Worm    91 AFHEEYVQFKSIRNIVMIFFYDLFWYTGVVQLGLMAGNRFVSIVYPMEY--KHIFSRTRSLYLIL 153

Human   165 WGTSICLGL---LPVMGWNC---LRDESTCSVV--RPLTKNNAAILSVSFLFMFALMLQLYIQIC 221
            :|  ..||.   ||.: ::|   |.|.:....|  :|.|......::|:.:.:..:::...:.|.
 Worm   154 FG--YFLGFLVSLPTL-FDCCHTLWDSNYYITVYEKPDTLYKYVDMAVNSISLCMMIISYAVIIL 215

Human   222 KI------------VMRHAHQIALQHHFL---------ATSHYVTTRKGVS-------------T 252
            |:            .:|...|.||.:...         .||.....|..||             :
 Worm   216 KVRASGRAMAKYQLTIRTRQQNALVNGVSLSCQMSECGRTSSVRPPRSQVSKKEMRLFIQFFVVS 280

Human   253 LAIILGTFAACWMPFTLYSLIADYTYPSIYTYATLLPATYNSIINPVIYAFRNQEIQKALCLICC 317
            |..:|......|:|:...|..|.:...|::        ..|:.:||.:|...|.::::.|..:.|
 Worm   281 LVFLLTWTTWQWLPYMSESKWAYFVMTSLF--------FINNSVNPTVYIIFNTQLRRELHYLIC 337

Human   318 GCIPSSLAQRAR 329
            .....:.||..|
 Worm   338 RHHVITTAQNKR 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GPR12NP_005279.1 7tmA_GPR12 45..312 CDD:320627 65/315 (21%)
TM helix 1 46..72 CDD:320627 8/25 (32%)
TM helix 2 79..104 CDD:320627 6/24 (25%)
TM helix 3 113..143 CDD:320627 8/35 (23%)
TM helix 4 155..175 CDD:320627 5/22 (23%)
TM helix 5 194..223 CDD:320627 3/28 (11%)
TM helix 6 244..274 CDD:320627 8/42 (19%)
TM helix 7 280..305 CDD:320627 5/24 (21%)
npr-19NP_508147.2 7tm_classA_rhodopsin-like 32..325 CDD:410626 65/309 (21%)
TM helix 1 32..56 CDD:410626 9/27 (33%)
TM helix 2 63..92 CDD:410626 7/28 (25%)
TM helix 3 104..134 CDD:410626 7/29 (24%)
TM helix 4 147..166 CDD:410626 5/20 (25%)
TM helix 5 191..212 CDD:410626 1/20 (5%)
TM helix 6 267..291 CDD:410626 2/23 (9%)
TM helix 7 300..325 CDD:410626 6/32 (19%)

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