DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MYO1H and Mhc

DIOPT Version :9

Sequence 1:XP_011536525.1 Gene:MYO1H / 283446 HGNCID:13879 Length:1044 Species:Homo sapiens
Sequence 2:NP_001162991.1 Gene:Mhc / 35007 FlyBaseID:FBgn0264695 Length:1962 Species:Drosophila melanogaster


Alignment Length:1058 Identity:334/1058 - (31%)
Similarity:511/1058 - (48%) Gaps:189/1058 - (17%)


- Green bases have known domain annotations that are detailed below.


Human    31 NLRKRFSENLIYTYIGTLLVSVNPYQELGIYTVSQMELYQGVNFFELPPHVYAIADNAYRMMCAE 95
            |||:|:...|||||.|...|::|||:...:||....::|:|....|:|||::||:|.||..|...
  Fly   105 NLRQRYYAKLIYTYSGLFCVAINPYKRYPVYTNRCAKMYRGKRRNEVPPHIFAISDGAYVDMLTN 169

Human    96 LNNHFILISGESGAGKTEASKKILEYFAVTCPMTQSLQIAR------DRLLFSNPVLEAFGNART 154
            ..|..:||:|||||||||.:||::.|||......::.:.|:      |:::.:||||||||||:|
  Fly   170 HVNQSMLITGESGAGKTENTKKVIAYFATVGASKKTDEAAKSKGSLEDQVVQTNPVLEAFGNAKT 234

Human   155 LRNDNSSRFGKYMDIQFDFQGIPVGGHIISYLIEKSRVVYQNEGERNFHIFYQLLAGGEEERLSY 219
            :||||||||||::.|.|...|...|..|.:||:||:||:.|...||::|||||:::|      |.
  Fly   235 VRNDNSSRFGKFIRIHFGPTGKLAGADIETYLLEKARVISQQSLERSYHIFYQIMSG------SV 293

Human   220 LGLE----RDPQLYKY--LSQGHCAKESSISDKNDWKTVSNAFSVIDFTEADLENLFGIIASVLH 278
            .|::    ....:|.|  :|||. ...:||.|..::.....||.::.||:.:.|:::.|.|:|:|
  Fly   294 PGVKDICLLTDNIYDYHIVSQGK-VTVASIDDAEEFSLTDQAFDILGFTKQEKEDVYRITAAVMH 357

Human   279 LGNIGFEE---DDQGCATIPDTHEIKWIAKLLGVHPSVLLEALTHRKIEAKTEEVICPLTLELSV 340
            :|.:.|::   ::|  |......|...::||.|...:.|.:.|...:|:...|.|.....::...
  Fly   358 MGGMKFKQRGREEQ--AEQDGEEEGGRVSKLFGCDTAELYKNLLKPRIKVGNEFVTQGRNVQQVT 420

Human   341 YARDAMAKAVYGRTFTWLVNKINSSLVNKDFTRKTVIGLLDIYGFEVFDKNGFEQFCINYCNEKL 405
            .:..|:.|.|:.|.|.|||.|.|.:|..:. .|:..||:|||.|||:|:.|||||.|||:.||||
  Fly   421 NSIGALCKGVFDRLFKWLVKKCNETLDTQQ-KRQHFIGVLDIAGFEIFEYNGFEQLCINFTNEKL 484

Human   406 QQLLIERTLKAEQAEYEMEGIEWEPIKYFNNKIIC-DLVEERHKGIISILDEECIRPGPATDLSF 469
            ||.........||.||:.|||:|..|.:..:.:.| ||: |:..||:|||:||.:.| .|||.:|
  Fly   485 QQFFNHHMFVLEQEEYKREGIDWAFIDFGMDLLACIDLI-EKPMGILSILEEESMFP-KATDQTF 547

Human   470 LEKL-EEKVGKHAHFETRKLAGPKGRKRIGWMEFRLLHYAGEVTYCTKGFLEKNNDLLYRHLKEV 533
            .||| ...:||.|.|:..|...| |::.   ..|.:.||||.|:|...|:||||.|.|...:.:.
  Fly   548 SEKLTNTHLGKSAPFQKPKPPKP-GQQA---AHFAIAHYAGCVSYNITGWLEKNKDPLNDTVVDQ 608

Human   534 LCKSKNIILRECFL----------LAELENRRRP---PTVGTQFKNSLSSLLETLISKEPSYIRC 585
            ..||:|.:|.|.|.          .|:....::.   .||.:.:|..|:||:.||.|.:|.::||
  Fly   609 FKKSQNKLLIEIFADHAGQSGGGEQAKGGRGKKGGGFATVSSAYKEQLNSLMTTLRSTQPHFVRC 673

Human   586 IKPNDRKEPSKFDDFLIRHQIKYLGLMEHLRVRRAGFAYRRKYEHFLQRYLGVELSHWVERLMMS 650
            |.||:.|:|...|..|:.||:...|::|.:|:.|.||..|..|..|                   
  Fly   674 IIPNEMKQPGVVDAHLVMHQLTCNGVLEGIRICRKGFPNRMMYPDF------------------- 719

Human   651 LFYKDRYKSLCPDTWPHWHGPPAEGVER-------LIKYIGYKPEEYKLGKTKIFIRFPRTLFAT 708
               |.|||.:||..        .:|||:       :||:|....::|:||.||:|.| ...|...
  Fly   720 ---KMRYKIMCPKL--------LQGVEKDKKATEIIIKFIDLPEDQYRLGNTKVFFR-AGVLGQM 772

Human   709 EDAFEFSKHQLVARIQATYKRCLGRREYVKKRQAAIKLEAHWRGALARKAIQRRKW--------- 764
            |:..:....::::.:||..:..|.|:.:.|.::..:.|:...|.  .||.:|.|.|         
  Fly   773 EEFRDERLGKIMSWMQAWARGYLSRKGFKKLQEQRVALKVVQRN--LRKYLQLRTWPWYKLWQKV 835

Human   765 --AVRIIRKFIKGFISRNKPLCPDNEEF---IVFVRKNY-ILNLRYHLPKTVLDKSWLRPPGILE 823
              .:.:.|  |:..|:|.:......||.   .|.|||.. .||.:....||.|..|.....|.|:
  Fly   836 KPLLNVSR--IEDEIARLEEKAKKAEELHAAEVKVRKELEALNAKLLAEKTALLDSLSGEKGALQ 898

Human   824 -----NASDLLRKMCVRNLVQKYCRGITAE---RKAMMQQK--------------------VVTS 860
                 ||....:|..:.|.::.....:|.|   |..:.|||                    |..:
  Fly   899 DYQERNAKLTAQKNDLENQLRDIQERLTQEEDARNQLFQQKKKADQEISGLKKDIEDLELNVQKA 963

Human   861 EIFRGRKDGYTESLNQPFVNSRIDE------------GDINPKVLQLISHEKIQYGVPVIKYDRK 913
            |..:..||....:||....:.  ||            |:.|.|     :.|::|.....|.:..|
  Fly   964 EQDKATKDHQIRNLNDEIAHQ--DELINKLNKEKKMQGETNQK-----TGEELQAAEDKINHLNK 1021

Human   914 GFKARQRQ-----------------------------LILTQKAAYVVELAKIKQKIEYS----- 944
             .||:..|                             |.|||:|  |.:|.:.|:::|.:     
  Fly  1022 -VKAKLEQTLDELEDSLEREKKVRGDVEKSKRKVEGDLKLTQEA--VADLERNKKELEQTIQRKD 1083

Human   945 -ALKGVSTSNLSDGILVI 961
             .|..: |:.|.|..:|:
  Fly  1084 KELSSI-TAKLEDEQVVV 1100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MYO1HXP_011536525.1 MYSc 8..711 CDD:214580 262/716 (37%)
MYSc_Myo1 26..700 CDD:276829 259/705 (37%)
Myosin_TH1 856..1019 CDD:283635 33/173 (19%)
MhcNP_001162991.1 Myosin_N 36..73 CDD:280832
MYSc 81..777 CDD:214580 262/718 (36%)
MYSc_Myh1_insects_crustaceans 100..765 CDD:276874 259/705 (37%)
Myosin_tail_1 842..1897 CDD:279860 60/272 (22%)
V_Alix_like 1557..1877 CDD:187408
ATP-synt_B <1671..1771 CDD:304375
TMPIT 1739..>1825 CDD:285135
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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