DRSC/TRiP Functional Genomics Resources

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Protein Alignment MYO1H and Mhc

DIOPT Version :10

Sequence 1:XP_011536525.1 Gene:MYO1H / 283446 HGNCID:13879 Length:1044 Species:Homo sapiens
Sequence 2:NP_523587.4 Gene:Mhc / 35007 FlyBaseID:FBgn0264695 Length:1962 Species:Drosophila melanogaster


Alignment Length:1064 Identity:337/1064 - (31%)
Similarity:519/1064 - (48%) Gaps:183/1064 - (17%)


- Green bases have known domain annotations that are detailed below.


Human    22 YTSESAFVDNLRKRFSENLIYTYIGTLLVSVNPYQELGIYTVSQMELYQGVNFFELPPHVYAIAD 86
            |.::::.:.|||:|:...|||||.|...|::|||:...:||....::|:|....|:|||::||:|
  Fly    96 YLNDASVLHNLRQRYYNKLIYTYSGLFCVAINPYKRYPVYTNRCAKMYRGKRRNEVPPHIFAISD 160

Human    87 NAYRMMCAELNNHFILISGESGAGKTEASKKILEYFAVTCPMTQSLQIAR------DRLLFSNPV 145
            .||..|.....|..:||:|||||||||.:||::.|||......::.:.|:      |:::.:|||
  Fly   161 GAYVDMLTNHVNQSMLITGESGAGKTENTKKVIAYFATVGASKKTDEAAKSKGSLEDQVVQTNPV 225

Human   146 LEAFGNARTLRNDNSSRFGKYMDIQFDFQGIPVGGHIISYLIEKSRVVYQNEGERNFHIFYQLLA 210
            |||||||:|:||||||||||::.|.|...|...|..|.:||:||:||:.|...||::|||||:::
  Fly   226 LEAFGNAKTVRNDNSSRFGKFIRIHFGPTGKLAGADIETYLLEKARVISQQSLERSYHIFYQIMS 290

Human   211 GGEEERLSYLGLE----RDPQLYKY--LSQGHCAKESSISDKNDWKTVSNAFSVIDFTEADLENL 269
            |      |..|::    ....:|.|  :|||. ...:||.|..::.....||.::.||:.:.|::
  Fly   291 G------SVPGVKDICLLTDNIYDYHIVSQGK-VTVASIDDAEEFSLTDQAFDILGFTKQEKEDV 348

Human   270 FGIIASVLHLGNIGFEE---DDQGCATIPDTHEIKWIAKLLGVHPSVLLEALTHRKIEAKTEEVI 331
            :.|.|:|:|:|.:.|::   ::|  |......|...::||.|...:.|.:.|...:|:...|.|.
  Fly   349 YRITAAVMHMGGMKFKQRGREEQ--AEQDGEEEGGRVSKLFGCDTAELYKNLLKPRIKVGNEFVT 411

Human   332 CPLTLELSVYARDAMAKAVYGRTFTWLVNKINSSLVNKDFTRKTVIGLLDIYGFEVFDKNGFEQF 396
            ....::....:..|:.|.|:.|.|.|||.|.|.:|..:. .|:..||:|||.|||:|:.|||||.
  Fly   412 QGRNVQQVTNSIGALCKGVFDRLFKWLVKKCNETLDTQQ-KRQHFIGVLDIAGFEIFEYNGFEQL 475

Human   397 CINYCNEKLQQLLIERTLKAEQAEYEMEGIEWEPIKYFNNKIIC-DLVEERHKGIISILDEECIR 460
            |||:.||||||.........||.||:.|||||..|.:..:..:| ||: |:..||:|||:||.:.
  Fly   476 CINFTNEKLQQFFNHHMFVLEQEEYQREGIEWTFIDFGMDLQLCIDLI-EKPMGILSILEEESMF 539

Human   461 PGPATDLSFLEKL-EEKVGKHAHFETRKLAGPKGRKRIGWMEFRLLHYAGEVTYCTKGFLEKNND 524
            | .|||.:|.||| ...:||.|.|:..|...| |::.   ..|.:.||||.|:|...|:||||.|
  Fly   540 P-KATDQTFSEKLTNTHLGKSAPFQKPKPPKP-GQQA---AHFAIAHYAGCVSYNITGWLEKNKD 599

Human   525 LLYRHLKEVLCKSKNIILRECFL----------LAELENRRRP---PTVGTQFKNSLSSLLETLI 576
            .|...:.:...||:|.:|.|.|.          .|:....::.   .||.:.:|..|:||:.||.
  Fly   600 PLNDTVVDQFKKSQNKLLIEIFADHAGQSGGGEQAKGGRGKKGGGFATVSSAYKEQLNSLMTTLR 664

Human   577 SKEPSYIRCIKPNDRKEPSKFDDFLIRHQIKYLGLMEHLRVRRAGFAYRRKYEHFLQRYLGVELS 641
            |.:|.::|||.||:.|:|...|..|:.||:...|::|.:|:.|.||..|..|..|          
  Fly   665 STQPHFVRCIIPNEMKQPGVVDAHLVMHQLTCNGVLEGIRICRKGFPNRMMYPDF---------- 719

Human   642 HWVERLMMSLFYKDRYKSLCPDTWPHWHGPPAEGVER-------LIKYIGYKPEEYKLGKTKIFI 699
                        |.|||.:||..        .:|||:       :||:|....::|:||.||:|.
  Fly   720 ------------KMRYKIMCPKL--------LQGVEKDKKATEIIIKFIDLPEDQYRLGNTKVFF 764

Human   700 RFPRTLFATEDAFEFSKHQLVARIQATYKRCLGRREYVKKRQAAIKLEAHWRGALARKAIQRRKW 764
            | ...|...|:..:....::::.:||..:..|.|:.:.|.::..:.|:...|.  .||.:|.|.|
  Fly   765 R-AGVLGQMEEFRDERLGKIMSWMQAWARGYLSRKGFKKLQEQRVALKVVQRN--LRKYLQLRTW 826

Human   765 A-VRIIRKF--------IKGFISRNKPLCPDNEEF---IVFVRKNY-ILNLRYHLPKTVLDKSWL 816
            . .::.:|.        |:..|:|.:......||.   .|.|||.. .||.:....||.|..|..
  Fly   827 PWYKLWQKVKPLLNVSRIEDEIARLEEKAKKAEELHAAEVKVRKELEALNAKLLAEKTALLDSLS 891

Human   817 RPPGILE-----NASDLLRKMCVRNLVQKYCRGITAE---RKAMMQQK----------------- 856
            ...|.|:     ||....:|..:.|.::.....:|.|   |..:.|||                 
  Fly   892 GEKGALQDYQERNAKLTAQKNDLENQLRDIQERLTQEEDARNQLFQQKKKADQEISGLKKDIEDL 956

Human   857 ---VVTSEIFRGRKDGYTESLNQPFVNSRIDE------------GDINPKVLQLISHEKIQYGVP 906
               |..:|..:..||....:||....:.  ||            |:.|.|     :.|::|....
  Fly   957 ELNVQKAEQDKATKDHQIRNLNDEIAHQ--DELINKLNKEKKMQGETNQK-----TGEELQAAED 1014

Human   907 VIKYDRKGFKARQRQ-----------------------------LILTQKAAYVVELAKIKQKIE 942
            .|.:..| .||:..|                             |.|||:|  |.:|.:.|:::|
  Fly  1015 KINHLNK-VKAKLEQTLDELEDSLEREKKVRGDVEKSKRKVEGDLKLTQEA--VADLERNKKELE 1076

Human   943 YSAL---KGVS--TSNLSDGILVI 961
            .:..   |.:|  |:.|.|..:|:
  Fly  1077 QTIQRKDKELSSITAKLEDEQVVV 1100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MYO1HXP_011536525.1 MYSc_Myo1 26..700 CDD:276829 260/710 (37%)
Adgb_C_mid-like <696..>763 CDD:412094 15/66 (23%)
globin helix H 696..720 CDD:412094 5/23 (22%)
IQ motif 744..762 CDD:412094 5/17 (29%)
Myosin_TH1 856..1037 CDD:461801 34/172 (20%)
MhcNP_523587.4 Myosin_N 33..75 CDD:460670
MYSc_Myh1_insects_crustaceans 100..765 CDD:276874 260/710 (37%)
Myosin_tail_1 842..1922 CDD:460256 60/269 (22%)
Blue background indicates that the domain is not in the aligned region.

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