DRSC/TRiP Functional Genomics Resources

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Protein Alignment MYO1H and myo1

DIOPT Version :10

Sequence 1:XP_011536525.1 Gene:MYO1H / 283446 HGNCID:13879 Length:1044 Species:Homo sapiens
Sequence 2:NP_595402.1 Gene:myo1 / 2539659 PomBaseID:SPBC146.13C Length:1217 Species:Schizosaccharomyces pombe


Alignment Length:1077 Identity:370/1077 - (34%)
Similarity:532/1077 - (49%) Gaps:208/1077 - (19%)


- Green bases have known domain annotations that are detailed below.


Human     6 TARDKVGVQDFVLLDAYTSESAFVDNLRKRFSENLIYTYIGTLLVSVNPYQELGIYTVSQMELYQ 70
            |.:..|||.|..||...|.|. ...||..||....||||||.:|:||||:::|||||:..::.||
pombe    35 TRKKTVGVDDLTLLSKITDEE-INKNLELRFRNGEIYTYIGHVLISVNPFRDLGIYTMDILKSYQ 98

Human    71 GVNFFELPPHVYAIADNAYRMMCAELNNHFILISGESGAGKTEASKKILEYFA-VTCPMTQSLQI 134
            |.|..|..|||||||:|||..|.:...|..|:||||||||||||:|:|::|.. |:..:...::.
pombe    99 GKNRLETSPHVYAIAENAYYQMKSYHENQCIIISGESGAGKTEAAKRIMQYITHVSKSVGTEIER 163

Human   135 ARDRLLFSNPVLEAFGNARTLRNDNSSRFGKYMDIQFDFQGIPVGGHIISYLIEKSRVVYQNEGE 199
            ..:.:|.:||:||:||.|:||||:||||.|||:::.|:..|:|||..|.:||:||:|:|.|...|
pombe   164 VSEIILATNPLLESFGCAKTLRNNNSSRHGKYLEMIFNSGGVPVGAKITNYLLEKNRIVNQVRNE 228

Human   200 RNFHIFYQLLAGGEEERLSYLGLERDPQLYKYLSQGHCAKESSISDKNDWKTVSNAFSVIDFTEA 264
            ||||||||......::.....|:: .|:.|.|.|...|.....|||:.|::...||..||..||.
pombe   229 RNFHIFYQFTKSAPQKYRDTYGIQ-GPENYVYTSACQCLSVDGISDEKDFQGTMNAMKVIGITEP 292

Human   265 DLENLFGIIASVLHLGNIGFEEDDQGCATIPDTHEIKWIAKLLGVHPSVLLEALTHRKIEAK--- 326
            :.:.:|.:::.:|.||||.|:|...|.:.|.|....:::..|:||..:.:..|||.|.::.:   
pombe   293 EQDEIFRMLSIILWLGNIQFQEGQDGGSVISDKSITEFLGYLIGVPVAAIERALTIRIMQTQHGA 357

Human   327 ----TEEVICPLTLELSVYARDAMAKAVYGRTFTWLVNKINSSLVNKDFTRKTVIGLLDIYGFEV 387
                ..||  ||....::..|||::.|:|...|.|:|.::|.:||..|.:....||:|||||||:
pombe   358 RRGSVYEV--PLNPTQALAVRDALSMAIYNCLFDWIVERVNKALVTSDNSVSNSIGILDIYGFEI 420

Human   388 FDKNGFEQFCINYCNEKLQQLLIERTLKAEQAEYEMEGIEWEPIKYFNNKIICDLVE-ERHKGII 451
            |:.|.|||.||||.||||||:.||.|||.||.||..|.|.|.||||||||::|||:| :|..|:.
pombe   421 FENNSFEQLCINYVNEKLQQIFIELTLKTEQEEYVREQIAWTPIKYFNNKVVCDLIESKRPPGLF 485

Human   452 SILDEECI---RPGPATDLSFLEKLEEKVGKHAHFETRKLAGPKGRKRIGWMEFRLLHYAGEVTY 513
            :.:::...   ....|.|.:|.::| ..:..:.|||.|:            .:|.:.||||:|||
pombe   486 AAMNDAIATAHADSAAADSAFAQRL-NFLSSNPHFEQRQ------------NQFIVKHYAGDVTY 537

Human   514 CTKGFLEKNNDLLYRHLKEVLCKSKNIILRECFLLAELEN-RRRPPTVGTQFKNSLSSLLETLIS 577
            ...|..:||.|.|...:..::..|.|..::..|.:||..| ||||||.|.:.|.|.:.|:|||:.
pombe   538 SITGMTDKNKDQLATDILNLIHSSNNEFMKSIFPVAEESNSRRRPPTAGDRIKTSANDLVETLMK 602

Human   578 KEPSYIRCIKPNDRKEPSKFDDFLIRHQIKYLGLMEHLRVRRAGFAYRRKYEHFLQRY--LGVEL 640
            .:|||||.||||..|.|:.:|..::.||||||||.|::|:||||||||:.::.|.||:  |..:.
pombe   603 CQPSYIRTIKPNQTKSPNDYDQQMVLHQIKYLGLQENIRIRRAGFAYRQAFDTFAQRFAVLSGKT 667

Human   641 SHWVERLMMSLFYKDRYKSLCPDTWPHWHGPPAEGVERLIKYIGYKPEEYKLGKTKIFIRFPRTL 705
            |           |...|.         |.|......|:::|.......||::|.:|:||:.|.||
pombe   668 S-----------YAGEYT---------WQGDDKSACEQILKDTNIPSSEYQMGTSKVFIKNPETL 712

Human   706 FATEDAFEFSKHQLVARIQATYKRCLGRREYVKKR-QAAIKLEAHWR---------------GAL 754
            ||.||..:.....:..|||..:      |.||::| :||..::..|.               ..|
pombe   713 FALEDMRDKFWDTMATRIQRAW------RSYVRRRSEAAACIQKLWNRNKVNMELERVRNEGTKL 771

Human   755 ARKAIQRRKWAVRIIRKFIKGFISRNKPLCPDNEEFIVFVRKNYILNLRYHLPKTVLDKSWLRPP 819
            .:...|||::::...|||...::|.:||              |..|              | ...
pombe   772 LQGKKQRRRYSILGSRKFYGDYLSASKP--------------NGTL--------------W-NTC 807

Human   820 GILENASDLLRKMCVRNLVQKYCRGITAERKAMMQQKVVTSEIFRGRKDGYTESLNQPFVNSRID 884
            |:.:|...:....| ..||.|..|               ||                        
pombe   808 GLSQNDHVIFSMRC-EVLVHKLGR---------------TS------------------------ 832

Human   885 EGDINPKVLQLISHEKIQYGVPVIKYDRKGFKARQRQLILTQKAAYVVELAKI---------KQK 940
                                           |...|||:||:|..|:| :.||         ::|
pombe   833 -------------------------------KPSPRQLVLTKKNLYLV-ITKIVDQKLTQQVEKK 865

Human   941 IEYSALKGVSTSNLSDGILVIHVSPEDSKQKGDAVLQCGHVFEAVTKLVMLVKKENIVNVVQGSL 1005
            ...|::..|..:||.|..:.|.   ..|.|.||..|:|....|.:|.|..:  ..||..:|..::
pombe   866 FAVSSIDSVGLTNLQDDWVAIR---NKSSQNGDMFLRCFFKTEFITTLKRI--NRNIQVIVGPTI 925

Human  1006 QFFISPG-------------------KEGTIVFDTGL 1023
            |:...||                   |.|||...|||
pombe   926 QYCRKPGKVQTVKTAKDETTKDYDYYKSGTIHVGTGL 962

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MYO1HXP_011536525.1 MYSc_Myo1 26..700 CDD:276829 281/688 (41%)
Adgb_C_mid-like <696..>763 CDD:412094 23/82 (28%)
globin helix H 696..720 CDD:412094 10/23 (43%)
IQ motif 744..762 CDD:412094 3/32 (9%)
Myosin_TH1 856..1037 CDD:461801 42/196 (21%)
myo1NP_595402.1 COG5022 1..1217 CDD:227355 370/1077 (34%)

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